DRSC/TRiP Functional Genomics Resources

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Protein Alignment SCaMC and slc25a23

DIOPT Version :9

Sequence 1:NP_729802.1 Gene:SCaMC / 39415 FlyBaseID:FBgn0052103 Length:583 Species:Drosophila melanogaster
Sequence 2:NP_001135638.1 Gene:slc25a23 / 100216197 XenbaseID:XB-GENE-5998763 Length:467 Species:Xenopus tropicalis


Alignment Length:480 Identity:247/480 - (51%)
Similarity:340/480 - (70%) Gaps:24/480 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 PTEIPIEDEERLERIFNKLDRDGDGRIDIHDLSAALHEFGLSSVY--AEKFLQQSDKDQSGNVGF 168
            |..:..:.|:|...:|::||.:.|||:||::|...|...|::..:  .::.|:..|.||.|.:.|
 Frog     4 PDSLDPDREKRYALLFSQLDSNRDGRVDINELREGLQALGMTPCHNAEQEILRAGDTDQDGQLDF 68

  Fly   169 AEFLHYVREHEKNLVLQFSHLDKNRDGKVDLEELISAFKDLGLDIDMDEARNLLTRMDKDGSLNI 233
            .||.||:.|.|:.|::.|:.||:|.||::|:.|:...|..||:.|.:.:|:.:|..||:||:|.|
 Frog    69 EEFTHYLEERERRLLIMFNSLDRNNDGQIDISEIQECFHGLGIHITLAQAKKVLQSMDRDGTLTI 133

  Fly   234 SFNEWRDFMLLAPSTDIHDLIKFWRHSTYLDIGEDMNVPDDFTQKEMQTGLWWRHLVAGGIAGAV 298
            .:.||||..||.|..::.|:|.:|:||:.|||||.:.|||:|::||:::|:||:.|:|||:||||
 Frog   134 DWLEWRDHFLLNPLHNMEDVITYWKHSSMLDIGESLAVPDEFSKKEIRSGMWWKQLLAGGVAGAV 198

  Fly   299 SRTCTAPLDRIKVYLQVQ-TQRMGISECMHIMLNEGGSRSMWRGNGINVLKIAPETAFKFAAYEQ 362
            |||.||||||:||.:||. :|.:.|...:.:|:.|||.||:||||||||:|||||:|.||.||||
 Frog   199 SRTGTAPLDRLKVLMQVHGSQGLSILRGLRVMIEEGGVRSLWRGNGINVIKIAPESAIKFMAYEQ 263

  Fly   363 MKRLIRGDDGSRQMSIVERFYAGAAAGGISQTIIYPMEVLKTRLALRRTGQYAGIADAAVKIYKQ 427
            :|:||||.  ...:.:.|||.||:.||.|:||.||||||||||:||||||||:|::|.|.:|.:.
 Frog   264 IKKLIRGQ--HETLRVRERFIAGSLAGAIAQTAIYPMEVLKTRMALRRTGQYSGMSDCARQILRN 326

  Fly   428 EGVRSFYRGYVPNILGILPYAGIDLAVYETLKRRYIANH--DNNEQPSFLVLLACGSTSSTLGQL 490
            ||||:|::||:||:|||:||||||||||||||..::..:  ..:..|..|||||||:.|||.||:
 Frog   327 EGVRAFFKGYIPNLLGIVPYAGIDLAVYETLKNTWLQRYRSSTSADPGVLVLLACGTVSSTCGQI 391

  Fly   491 CSYPLALVRTRLQAQAAETIANQKRKTQIPLKSSDAHSGEETMTGLFRKIVRQEGLTGLYRGITP 555
            .||||||||||:||||                 |...|.:.:|..|||.||.:||..||||||.|
 Frog   392 ASYPLALVRTRMQAQA-----------------SVQGSPQLSMVALFRHIVAREGFLGLYRGIAP 439

  Fly   556 NFLKVLPAVSISYVVYEYTSRALGI 580
            ||:||:|||||||||||...|.||:
 Frog   440 NFMKVIPAVSISYVVYENMKRLLGV 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SCaMCNP_729802.1 FRQ1 100..247 CDD:227455 53/142 (37%)
EFh 116..176 CDD:238008 22/61 (36%)
EFh 186..242 CDD:238008 24/55 (44%)
Mito_carr 285..370 CDD:278578 55/85 (65%)
Mito_carr 375..463 CDD:278578 58/87 (67%)
Mito_carr 470..581 CDD:278578 62/111 (56%)
slc25a23NP_001135638.1 EF-hand_7 18..75 CDD:290234 20/56 (36%)
EFh 19..73 CDD:238008 19/53 (36%)
EFh 59..104 CDD:238008 20/44 (45%)
EFh 85..142 CDD:238008 24/56 (43%)
EF-hand_7 85..137 CDD:290234 20/51 (39%)
Mito_carr 185..270 CDD:278578 54/84 (64%)
PTZ00169 190..462 CDD:240302 171/290 (59%)
Mito_carr 279..366 CDD:278578 58/86 (67%)
Mito_carr 372..463 CDD:278578 60/107 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 128 1.000 Domainoid score I5220
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 493 1.000 Inparanoid score I1368
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D333952at33208
OrthoFinder 1 1.000 - - FOG0000464
OrthoInspector 1 1.000 - - otm47587
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1887
SonicParanoid 1 1.000 - - X287
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.090

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