DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Smyd4-2 and SET6

DIOPT Version :9

Sequence 1:NP_648574.1 Gene:Smyd4-2 / 39414 FlyBaseID:FBgn0036282 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_015160.1 Gene:SET6 / 855938 SGDID:S000006086 Length:373 Species:Saccharomyces cerevisiae


Alignment Length:383 Identity:70/383 - (18%)
Similarity:134/383 - (34%) Gaps:134/383 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   260 ETKDKGRFVVANEGLRTGDVLLFEEPVAACLEPSYF-GTH---------CHHCFKRLHTPVSCLH 314
            :||..||...:|..:..|..:         |:.|.| ||.         ||:||           
Yeast    18 QTKWGGRACFSNGNIPKGTTV---------LQVSNFTGTSISYEFRKEVCHNCF----------- 62

  Fly   315 CSGIAFCSAQCMGEACSSYHRFECEYM-DLM------------IGSGMSILCFIALRIFTQAPSL 366
                |:.:|:.|      .::...:|: ||:            :|:|:..........:.|.|::
Yeast    63 ----AYANAKTM------KYKLNYDYLRDLVCNAHYQINPKKFLGAGLWFCSEHCRTSYLQIPNI 117

  Fly   367 EQGLATANLLFEHLCS----HEEDRQPDDYLRRALMSGFLLRILQ------KSLYFGR----RKT 417
            .:.:....:|..|..|    :....:.::.|...|:|.   .::|      :|.:..|    :..
Yeast   118 IELIECYEILLHHFPSMLKRYNYTSEQEEKLNSILISE---NVIQSSWDEIESKWIPRINNMKSA 179

  Fly   418 EGVN---PTAVELQ-----VATALLGLL----QVLQYNAHQIYQT-QVTEEHRFD--------GS 461
            :.:|   ||..:..     |..:|..|.    |.:.|.|..:.|: ::::..:|.        ..
Yeast   180 KRINQLPPTCEDEYCCIRFVCESLFNLKYMDPQCITYRAFNMLQSNELSKISKFPVLLHFQKLVF 244

  Fly   462 KTVYL-------------------------AAGLYGTG-----------------SYFNHECWPS 484
            :|:|:                         |.||:..|                 |||||.|.|:
Yeast   245 QTLYILLPSHLHRMLSIPLLRHILGTEYGNAFGLWQEGEASDSREYFGYWVFPEASYFNHSCNPN 309

  Fly   485 TACHFVGKKLVLTATRPHRANELVAVNYGPIFIKNNLKERQRSLRGRYSFSCSCMACQ 542
            ...:..|..::.|..|..:.:|.:.::|..:.....:| |:..|...:.|.|:|..|:
Yeast   310 ITKYRKGNSMLFTMNRDIKKDEQICIDYSGVLDLPTVK-RRAFLADSWFFDCACERCK 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-2NP_648574.1 TPR_11 142..205 CDD:290150
zf-MYND 299..338 CDD:280009 7/38 (18%)
SET <474..513 CDD:279228 12/55 (22%)
SET6NP_015160.1 SET <1..370 CDD:225491 70/383 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346092
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.