DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-2 and ATXR2

DIOPT Version :10

Sequence 1:NP_648574.1 Gene:Smyd4-2 / 39414 FlyBaseID:FBgn0036282 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_188819.2 Gene:ATXR2 / 821736 AraportID:AT3G21820 Length:473 Species:Arabidopsis thaliana


Alignment Length:532 Identity:111/532 - (20%)
Similarity:175/532 - (32%) Gaps:179/532 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 AANLAVMRAPDRNADPVLDEGLTLALAYRSRASILIR----LGEGEAALND-------LKLAINF 171
            ||::|.:.||  ...|.|.|.....:..|....|.::    :|:|..|.::       ||..|..
plant    12 AADVAALLAP--LPTPQLQEYFNKLITSRRCNGIEVKNNGTIGKGVYANSEFDEDELILKDEILV 74

  Fly   172 GLELKSSVDYYLKMAKAYAVMGEPARAEISLKIAEKMPG----CDATHIALCRKELSSVKPKPKE 232
            |::..|:....|..:..:..:|. ...:|..|:..|..|    ||                   :
plant    75 GIQHSSNKVDCLVCSFCFRFIGS-IEKQIGRKLYFKNLGVSGCCD-------------------D 119

  Fly   233 ATSEQVPQLAHGESAELVGASKVVRLVETKDKGRFVVANEGLRTGDVLLFEEPVAACLEPSYFGT 297
            .:||:...:.:..:.|..|.|....  .|..:|  ||::  |..|::.|                
plant   120 DSSEEDECVKYNGNEEQCGGSSSSH--NTLPEG--VVSS--LMNGEMAL---------------- 162

  Fly   298 HCHHCFK-RLHTPVSCL-HCSGIAFCSAQCMGEACSSYHRFEC--------------EYM----- 341
              .|..| .|.:|:||. .|....:||..|......|.|...|              |::     
plant   163 --PHTDKFPLPSPLSCPGGCQEAFYCSESCAAADWESSHSLLCTGERSESISREALGEFIKHAND 225

  Fly   342 --DLMIGSGMSILCFIALRIFTQAPSLEQGLATANLLFEHLCSHEEDRQPDDYLRRALMSGFLLR 404
              |:.:.:..:| .|..||.             ..|..||:....:..:|...|        ||.
plant   226 TNDIFLLAAKAI-AFTILRY-------------RKLKAEHVDKKAKQSEPKQSL--------LLE 268

  Fly   405 ILQK-SLYFGRR------KTEGVNPT---AVELQV---ATALLGLLQVLQYNAH-------QIY- 448
            ..:. |:.:.||      ..:.|:||   |..:|:   |...|.||::..::..       :|| 
plant   269 AWKPVSIGYKRRWWDCIALPDDVDPTDEGAFRMQIKNLACTSLELLKIAIFDKECEALFSLEIYG 333

  Fly   449 --------------------------------QTQVTEE--HRF-----DGSKTVYLAAGLYGTG 474
                                            :.:.|||  ..|     |...........:...
plant   334 NIIGMFELNNLDLVVASPVEDYFLYIDDLPDAEKEETEEITRPFLDALGDEYSDCCQGTAFFPLQ 398

  Fly   475 SYFNHECWPSTACHFVGK-----KLVLTATRPHRANELVAVNYGPIFIKNNL--KERQRSLRGRY 532
            |..||.|.|: |..|..:     :.|:.|.|....||.|.::|    |...|  |||| :|...|
plant   399 SCMNHSCCPN-AKAFKREEDRDGQAVIIALRRISKNEEVTISY----IDEELPYKERQ-ALLADY 457

  Fly   533 SFSCSCMACQEN 544
            .|||.|..|.|:
plant   458 GFSCKCSKCLED 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-2NP_648574.1 BepA 87..205 CDD:443813 22/97 (23%)
SET_SMYD4 249..541 CDD:380934 80/381 (21%)
zf-MYND 299..338 CDD:460312 12/40 (30%)
ATXR2NP_188819.2 zf-MYND <173..203 CDD:460312 9/29 (31%)
SET_SMYD <380..466 CDD:380997 27/91 (30%)

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