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Protein Alignment Smyd4-2 and Smyd3

DIOPT Version :9

Sequence 1:	NP_648574.1	Gene:	Smyd4-2 / 39414	FlyBaseID:	FBgn0036282	Length:	663	Species:	Drosophila melanogaster
Sequence 2:	NP_081464.1	Gene:	Smyd3 / 69726	MGIID:	1916976	Length:	428	Species:	Mus musculus

Alignment Length:	438	Identity:	96/438 - (21%)
Similarity:	171/438 - (39%)	Gaps:	107/438 - (24%)

- Green bases have known domain annotations that are detailed below.

  Fly   266 RFVVANEG--------LRTGDVLLFEEPVAACLEPSYFGTHCHHCFKRLHTPVSCLHCSGIAFCS 322
            :|..||.|        ||.|::|...:|:|..:.....|..|..|.......:.|..|....:||
Mouse     8 KFTTANRGNGLRAVAPLRPGELLFRSDPLAYTVCKGSRGVVCDRCLLGKEKLMRCSQCRIAKYCS 72

  Fly   323 AQCMGEACSSYHRFECEYM---------DLMIGSGMSILCFIALRIFTQAPSLEQGLATANLLFE 378
            |:|..:|... ||.||..:         |     .:.:|..:.:::..:.||..:.|.:...|..
Mouse    73 AKCQKKAWPD-HRRECSCLKSCKPRYPPD-----SVRLLGRVIVKLMDEKPSESEKLYSFYDLES 131

  Fly   379 HLCSHEEDRQPDDYLRRALMSGFLLRILQKSLYFGRRKTEGVN--PTAVELQVATALLGLLQVLQ 441
            ::....||::  :.||:..|:         ..:|.|.:.:..:  |.:.:|..|.|     :|:
Mouse   132 NISKLTEDKK--EGLRQLAMT---------FQHFMREEIQDASQLPPSFDLFEAFA-----KVI- 179

  Fly   442 YNAHQIYQTQVTEEHRFDGSKTVYLAAGLYGTGSYFNHECWPSTACHFVGKKLVLTATRPHRANE 506
            .|:..|...::.|           :..|||.:.|..||.|.|:.:..|.|..|:|.|.|...|.|
Mouse   180 CNSFTICNAEMQE-----------VGVGLYPSMSLLNHSCDPNCSIVFNGPHLLLRAVREIEAGE 233

  Fly   507 LVAVNYGPIFIKNNLKERQRSLRGRYSFSCSCMACQ-------------ENW----PLLQKLDKQ 554
            .:.:.|..:.:.:  :||::.||.:|.|.|.|:.||             :.|    ..|:|:::.
Mouse   234 ELTICYLDMLMTS--EERRKQLRDQYCFECDCIRCQTQDKDADMLTGDEQIWKEVQESLKKIEEL 296

  Fly   555 VRFW--------CTSANCSNLLKFPK---------DLAKDVRCPRCRKNISLKESVAKMIKIEEL 602
            ...|        |.:...||..:.|.         |.|.|.    |.....|:|::...::..|.
Mouse   297 KAHWKWEQVLALCQAIINSNSNRLPDINIYQLKVLDCAMDA----CINLGMLEEALFYAMRTMEP 357

  Fly   603 YR------EAARAMEAQKTVEAIELFK-------ESLDMFFQVAALPH 637
            ||      ...|.::..| |..::|.:       ::|.:.|.:..:.|
Mouse   358 YRIFFPGSHPVRGVQVMK-VGKLQLHQGMFPQAMKNLRLAFDIMKVTH 404

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.