DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-2 and SMYD3

DIOPT Version :9

Sequence 1:NP_648574.1 Gene:Smyd4-2 / 39414 FlyBaseID:FBgn0036282 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_001161212.1 Gene:SMYD3 / 64754 HGNCID:15513 Length:428 Species:Homo sapiens


Alignment Length:438 Identity:95/438 - (21%)
Similarity:168/438 - (38%) Gaps:107/438 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   266 RFVVANEG--------LRTGDVLLFEEPVAACLEPSYFGTHCHHCFKRLHTPVSCLHCSGIAFCS 322
            :|..|..|        ||.|::|...:|:|..:.....|..|..|.......:.|..|....:||
Human     8 KFATAKRGNGLRAVTPLRPGELLFRSDPLAYTVCKGSRGVVCDRCLLGKEKLMRCSQCRVAKYCS 72

  Fly   323 AQCMGEACSSYHRFECEYM---------DLMIGSGMSILCFIALRIFTQAPSLEQGLATANLLFE 378
            |:|..:|... |:.||:.:         |     .:.:|..:..::...|||..:.|.:...|..
Human    73 AKCQKKAWPD-HKRECKCLKSCKPRYPPD-----SVRLLGRVVFKLMDGAPSESEKLYSFYDLES 131

  Fly   379 HLCSHEEDRQPDDYLRRALMSGFLLRILQKSLYFGRRKTEGVN--PTAVELQVATALLGLLQVLQ 441
            ::....||::  :.||:.:|:         ..:|.|.:.:..:  |.|.:|..|.|     :|: 
Human   132 NINKLTEDKK--EGLRQLVMT---------FQHFMREEIQDASQLPPAFDLFEAFA-----KVI- 179

  Fly   442 YNAHQIYQTQVTEEHRFDGSKTVYLAAGLYGTGSYFNHECWPSTACHFVGKKLVLTATRPHRANE 506
            .|:..|...::.|           :..|||.:.|..||.|.|:.:..|.|..|:|.|.|.....|
Human   180 CNSFTICNAEMQE-----------VGVGLYPSISLLNHSCDPNCSIVFNGPHLLLRAVRDIEVGE 233

  Fly   507 LVAVNYGPIFIKNNLKERQRSLRGRYSFSCSCMACQ-------------ENW----PLLQKLDKQ 554
            .:.:.|..:.:.:  :||::.||.:|.|.|.|..||             :.|    ..|:|:::.
Human   234 ELTICYLDMLMTS--EERRKQLRDQYCFECDCFRCQTQDKDADMLTGDEQVWKEVQESLKKIEEL 296

  Fly   555 VRFW--------CTSANCSNLLKFPK---------DLAKDVRCPRCRKNISLKESVAKMIKIEEL 602
            ...|        |.:...||..:.|.         |.|.|.    |.....|:|::....:..|.
Human   297 KAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDA----CINLGLLEEALFYGTRTMEP 357

  Fly   603 YR------EAARAMEAQKTVEAIELFK-------ESLDMFFQVAALPH 637
            ||      ...|.::..| |..::|.:       ::|.:.|.:..:.|
Human   358 YRIFFPGSHPVRGVQVMK-VGKLQLHQGMFPQAMKNLRLAFDIMRVTH 404

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Smyd4-2NP_648574.1 TPR_11 142..205 CDD:290150
zf-MYND 299..338 CDD:280009 10/38 (26%)
SET <474..513 CDD:279228 12/38 (32%)
SMYD3NP_001161212.1 S-adenosyl-L-methionine binding. /evidence=ECO:0000269|Ref.12 14..16 0/1 (0%)
zf-MYND 49..87 CDD:280009 10/38 (26%)
SET <201..239 CDD:279228 12/37 (32%)