DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-2 and SMYD2

DIOPT Version :9

Sequence 1:NP_648574.1 Gene:Smyd4-2 / 39414 FlyBaseID:FBgn0036282 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_064582.2 Gene:SMYD2 / 56950 HGNCID:20982 Length:433 Species:Homo sapiens


Alignment Length:415 Identity:86/415 - (20%)
Similarity:139/415 - (33%) Gaps:145/415 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   264 KGRFVVANEGLRTGDVLLFEEPV-AACLEPSYFGTHCHHCFKRLHTPVSCLHCSGIAFCSAQCMG 327
            |||.:.|.:..:.|| |||..|. |..|..:..|.||.:||.|......|..|....:|:.:|..
Human    17 KGRGLRALQPFQVGD-LLFSCPAYAYVLTVNERGNHCEYCFTRKEGLSKCGRCKQAFYCNVECQK 80

  Fly   328 EACSSYHRFECEYMDLMIGSGMSILCFIALRIFTQAPSLEQGLATANLLFEHLCSHEEDRQPDDY 392
            |.. ..|:.||..| ::.|                                      |:..|.:.
Human    81 EDW-PMHKLECSPM-VVFG--------------------------------------ENWNPSET 105

  Fly   393 LRRALMSGFLLRILQKSLYFGRRKTEGVNPTAVELQVATALLGLLQVLQYNAH---------QIY 448
            :|      ...|||.|         :.::|.      .|....||.|.::.:|         .:.
Human   106 VR------LTARILAK---------QKIHPE------RTPSEKLLAVKEFESHLDKLDNEKKDLI 149

  Fly   449 QTQVTEEHRF--------DGSKTV-------------------YLAAGLYGTGSYFNHECWPSTA 486
            |:.:...|.|        |....|                   :|.:.::...:..||.|.|:..
Human   150 QSDIAALHHFYSKHLGFPDNDSLVVLFAQVNCNGFTIEDEELSHLGSAIFPDVALMNHSCCPNVI 214

  Fly   487 CHFVGKKLVLTATRPHRANELVAVNYGPIFIKNNLKERQRSLRGRYSFSCSCMACQENWPLLQKL 551
            ..:.|....:.|.:..:..|.|..:|  |.:....::|...||..|.|:|.   |||        
Human   215 VTYKGTLAEVRAVQEIKPGEEVFTSY--IDLLYPTEDRNDRLRDSYFFTCE---CQE-------- 266

  Fly   552 DKQVRFWCTSANCSNLLKFPKDLAK-DVR----CPRCRKNISLKESVAKMIK-----IEELYREA 606
                   ||:.:        ||.|| ::|    .|:.       |::..|::     ||| :|.|
Human   267 -------CTTKD--------KDKAKVEIRKLSDPPKA-------EAIRDMVRYARNVIEE-FRRA 308

  Fly   607 ARAMEAQKTVEAIELFKESLDMFFQ 631
            .......:.:|..||.:|.:...|:
Human   309 KHYKSPSELLEICELSQEKMSSVFE 333

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Smyd4-2NP_648574.1 TPR_11 142..205 CDD:290150
zf-MYND 299..338 CDD:280009 10/38 (26%)
SET <474..513 CDD:279228 8/38 (21%)
SMYD2NP_064582.2 SET_SMYD2 7..269 CDD:380979 67/333 (20%)
S-adenosyl-L-methionine binding 17..19 1/1 (100%)
zf-MYND 52..90 CDD:396356 10/38 (26%)
Peptide substrate binding 183..185 0/1 (0%)