DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-2 and Smyd5

DIOPT Version :10

Sequence 1:NP_648574.1 Gene:Smyd4-2 / 39414 FlyBaseID:FBgn0036282 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_659167.2 Gene:Smyd5 / 232187 MGIID:108048 Length:416 Species:Mus musculus


Alignment Length:388 Identity:82/388 - (21%)
Similarity:133/388 - (34%) Gaps:116/388 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 AELVGASKVVRLVET-KDKGRFVVANEGLRTGDVLLFEEPVAA----------------CL---- 290
            |:....|..||.|:: |.||.|  |.:.:|.|:.:..|.|:.|                ||    
Mouse    16 ADRARGSVEVRYVDSIKGKGLF--ATQLIRKGETIFIERPLVAAQFLWNALYQYRACDHCLRALE 78

  Fly   291 -----------EPSYFGTHCHHCFKRLHTPVSCLHCSGIAFCSAQCMGEACSSYHRFEC------ 338
                       :||....|...|..|.....:|.||. :.:|||:|...|...||:..|      
Mouse    79 KAEENAQRLTGKPSQILPHPELCSVRKDLHQNCPHCQ-VMYCSAECRLAAAEQYHQILCPGPSHD 142

  Fly   339 -------------------EYMDLMIGSGMSILCFIALRIFTQAPSLEQGLATANLLFEHLCSHE 384
                               |...:|:.:.|       :....||...:..:.    ||.|.||..
Mouse   143 PRHPLNKLQEAWRSVHYPPETASIMLMARM-------VATVKQAKDKDHWVR----LFNHFCSRT 196

  Fly   385 EDRQPDDYLRRALMSG-------FLLRILQKSLY----------------FGRRKTEGVNPTAVE 426
            .::  :..:...|:.|       .||.:.:::||                |....|.|.......
Mouse   197 ANQ--EQAIVHKLLKGKFKDQLELLLGLFKEALYEEALSLWFTPEGFRSLFALVGTNGQGIGTSS 259

  Fly   427 LQVATALLGLLQVLQYNAHQIYQTQVTEEHR-FDGSKTVYL---AAGLYGTGSYFNHECWPSTAC 487
            |.........|::...:..|: .|.:.:.:: .:.:...:|   .:||:...|..||.|.|:...
Mouse   260 LSQWVHACDALELTPQDREQL-DTFIDQLYKDIEAATGEFLNCEGSGLFVLQSCCNHSCVPNAET 323

  Fly   488 HFVGKKLVL--TATRPHRANELVAVNYGPIFIKNNLKERQRS-------LRGRYSFSCSCMAC 541
            .|.....||  ||....:..|.:.::|      .:..:|:||       ||..|.|:|||..|
Mouse   324 SFPENNFVLHVTALEDIKPGEEICISY------LDCCQRERSRHSRHKILRENYLFNCSCPKC 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-2NP_648574.1 BepA 87..205 CDD:443813
SET_SMYD4 249..541 CDD:380934 80/384 (21%)
zf-MYND 299..338 CDD:460312 12/38 (32%)
Smyd5NP_659167.2 SET_SMYD5 22..383 CDD:380919 81/382 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 383..416
Blue background indicates that the domain is not in the aligned region.

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