DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smyd4-2 and Smyd2

DIOPT Version :10

Sequence 1:NP_648574.1 Gene:Smyd4-2 / 39414 FlyBaseID:FBgn0036282 Length:663 Species:Drosophila melanogaster
Sequence 2:NP_081072.1 Gene:Smyd2 / 226830 MGIID:1915889 Length:433 Species:Mus musculus


Alignment Length:415 Identity:85/415 - (20%)
Similarity:132/415 - (31%) Gaps:145/415 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   264 KGRFVVANEGLRTGDVLLFEEPVAAC-LEPSYFGTHCHHCFKRLHTPVSCLHCSGIAFCSAQCMG 327
            |||.:.|......|| |||..|..|| |.....|.||..||.|......|..|....:|..:|..
Mouse    17 KGRGLRALRPFHVGD-LLFSCPAYACVLTVGERGHHCECCFARKEGLSKCGRCKQAFYCDVECQK 80

  Fly   328 EACSSYHRFECEYMDLMIGSGMSILCFIALRIFTQAPSLEQGLATANLLFEHLCSHEEDRQPDDY 392
            |.. ..|:.||..| :::|                                      |:..|.:.
Mouse    81 EDW-PLHKLECSSM-VVLG--------------------------------------ENWNPSET 105

  Fly   393 LRRALMSGFLLRILQKSLYFGRRKTEGVNPTAVELQVATALLGLLQVLQYNAH---------QIY 448
            :|      ...|||.|         :.::|.      .|....||.|.::.:|         .:.
Mouse   106 VR------LTARILAK---------QKIHPE------RTPSEKLLAVREFESHLDKLDNEKKDLI 149

  Fly   449 QTQVTEEHRF--------DGSKTV-------------------YLAAGLYGTGSYFNHECWPSTA 486
            |:.:...|:|        |.|..|                   :|.:.::...:..||.|.|:..
Mouse   150 QSDIAALHQFYSKYLEFPDHSSLVVLFAQVNCNGFTIEDEELSHLGSAIFPDVALMNHSCCPNVI 214

  Fly   487 CHFVGKKLVLTATRPHRANELVAVNYGPIFIKNNLKERQRSLRGRYSFSCSCMACQENWPLLQKL 551
            ..:.|....:.|.:.....:.|..:|  |.:....::|...||..|.|:|.|..|...       
Mouse   215 VTYKGTLAEVRAVQEIHPGDEVFTSY--IDLLYPTEDRNDRLRDSYFFTCECRECTTK------- 270

  Fly   552 DKQVRFWCTSANCSNLLKFPKDLAK-DVR----CPRCRKNISLKESVAKMIK-----IEELYREA 606
                               .||.|| :||    .|:.       |::..|::     ||| :|.|
Mouse   271 -------------------DKDKAKVEVRKLSSPPQA-------EAIRDMVRYARNVIEE-FRRA 308

  Fly   607 ARAMEAQKTVEAIELFKESLDMFFQ 631
            .......:.:|..||.:|.:...|:
Mouse   309 KHYKSPSELLEICELSQEKMSSVFE 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Smyd4-2NP_648574.1 BepA 87..205 CDD:443813
SET_SMYD4 249..541 CDD:380934 65/313 (21%)
zf-MYND 299..338 CDD:460312 10/38 (26%)
Smyd2NP_081072.1 SET_SMYD2 7..269 CDD:380979 66/315 (21%)
zf-MYND 52..90 CDD:460312 10/38 (26%)
TPR_10 388..422 CDD:463861
Blue background indicates that the domain is not in the aligned region.

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