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Protein Alignment Smyd4-2 and Smyd1

DIOPT Version :9

Sequence 1:	NP_648574.1	Gene:	Smyd4-2 / 39414	FlyBaseID:	FBgn0036282	Length:	663	Species:	Drosophila melanogaster
Sequence 2:	NP_001153599.1	Gene:	Smyd1 / 12180	MGIID:	104790	Length:	490	Species:	Mus musculus

Alignment Length:	411	Identity:	86/411 - (20%)
Similarity:	151/411 - (36%)	Gaps:	86/411 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly   250 VGASKVVRLVETKDKGRFVVANEGLRTGDVLLFEEPVAACLEPSYFGTHCHHCFKRLHTPVSCLH 314
            :|:.:.|.:..::.|||.:.|.:.....||:..|...:|.:..|.....||.||||......|..
Mouse     3 IGSMENVEVFTSEGKGRGLKATKEFWAADVIFAERAYSAVVFDSLINFVCHTCFKRQEKLHRCGQ 67

  Fly   315 CSGIAFCSAQCMGEACSSYHRFEC---EYMDLMIGSGMSILCFIALRIFTQAPSLEQG-LATANL 375
            |....:|...|..:|..: |:.||   :....:....:.:...|..|:..:...|.:| |.:.:.
Mouse    68 CKFAHYCDRTCQKDAWLN-HKNECAAIKKYGKVPNENIRLAARIMWRVEREGTGLTEGCLVSVDD 131

  Fly   376 LFEHLCSHEEDRQPDDYLRRALMSGFLLRILQKSLYFGRRKTEGVNPTAVELQVATALLGLLQVL 440
            |..|:....|:.|.:   .|..:..||.....:|..|             .:|..:.:.|   |:
Mouse   132 LQNHVEHFGEEEQKE---LRVDVDTFLQYWPPQSQQF-------------SMQYISHIFG---VI 177

  Fly   441 QYNAHQIYQTQVTEEHRFDGSKTVYLAAGLYGTGSYFNHECWPSTACHF-------------VGK 492
            ..|...:...:        |.:.|  ..|::......||:|||:....|             ...
Mouse   178 NCNGFTLSDQR--------GLQAV--GVGIFPNLGLVNHDCWPNCTVIFNNGNHEAVKSMFHTQM 232

  Fly   493 KLVLTATRPHRANELVAVNYGPIFIKNNLKERQRSLRGRYSFSCSCMACQENWP----LLQKLDK 553
            ::.|.|.......|.:.|:|  |...:..:||:|.|:.:|.|.|||..||:...    |..|.|.
Mouse   233 RIELRALGKISEGEELTVSY--IDFLHLSEERRRQLKKQYYFDCSCEHCQKGLKDDLFLAAKEDP 295

  Fly   554 QVRFWCTSANCSNLLKFPKDLAKDVRCPR-----------CRKNISLKESV-------------- 593
            :.    :......:::|.||..:.:...|           ||:.:..:|.|
Mouse   296 KP----SQEVVKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSI 356

  Fly   594 -AKMIKIEELYREA---ARAM 610
             ::::...:.|.||   ||.|
Mouse   357 ASEVLSYLQAYEEASHYARRM 377

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.