DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG32104 and IYO

DIOPT Version :9

Sequence 1:NP_648573.2 Gene:CG32104 / 39413 FlyBaseID:FBgn0052104 Length:1215 Species:Drosophila melanogaster
Sequence 2:NP_195557.2 Gene:IYO / 830001 AraportID:AT4G38440 Length:1465 Species:Arabidopsis thaliana


Alignment Length:1500 Identity:296/1500 - (19%)
Similarity:511/1500 - (34%) Gaps:503/1500 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 VTSTTEKNEEQIQPVPKEIIPQ-----IPTSVPKERGSHVSQVLLDEIQENILGDVKGSK----- 115
            |.|..||...:.:|..|.:.|:     .|.:..:..|.|::.|.....|.....|.:..:     
plant    21 VGSIVEKGISENKPPSKPLPPRPSLLSFPVARHRSHGPHLAPVGSSIAQPKDYNDDQEEEEAEER 85

  Fly   116 -MDPSSLGNV-------------LGELVERTEG-----------TRRSAFPETK--NVDSSKPLS 153
             |:..|:...             ||...:...|           :|:....||:  .|.|:...:
plant    86 FMNADSIAAFAKPLQRKEKKDMDLGRWKDMVSGDDPASTHVPQQSRKLKIIETRPPYVASADAAT 150

  Fly   154 IFAKQLLGAKSS-----------------TKEK-----------SNKVSDFPRNDTSSIIKDAKL 190
            ..:..||.|::|                 |||:           ||.:.  .|:.:||:..|   
plant   151 TSSNTLLAARASDQREFVSDKAPFIKNLGTKERVPLNASPPLAVSNGLG--TRHASSSLESD--- 210

  Fly   191 GKELHQENLNVLKQMNEQDILTEKERLLASLDPSLIALLS-------KKR-----------QTTP 237
               :..||...|:.|:..:|...:..||..:||:|:::|.       |||           :|..
plant   211 ---IDVENHAKLQTMSPDEIAEAQAELLDKMDPALLSILKKRGEAKLKKRKHSVQGVSITDETAK 272

  Fly   238 NSKPPNP-NSPKVIEAPPMPAQSTRAQDPQIS------SLTDGNPAIELLQESDKGNWLNFNLVE 295
            ||:.... .:|||:   .:|.:.:..|.|.|:      :.|:...|...|:.|..|     |:||
plant   273 NSRTEGHFVTPKVM---AIPKEKSVVQKPGIAQGFVWDAWTERVEAARDLRFSFDG-----NVVE 329

  Fly   296 EHKLAWMRDIPAKISELKPGEQFNARFDWKGVLLPHTLKDQDASKQIDERELYLHGEEADRPGYA 360
            |       |:   :|..:.|.:      |.||            :...||:......:....||.
plant   330 E-------DV---VSPAETGGK------WSGV------------ESAAERDFLRTEGDPGAAGYT 366

  Fly   361 LQELFRLARSTVLQQRLSAFGAIAGIFSIYNQGFYDQVLSL------------------------ 401
            ::|...||||.:..||..|...:|.:.        |:.|:.                        
plant   367 IKEAIALARSVIPGQRCLALHLLASVL--------DKALNKLCQSRIGYAREEKDKSTDWEAIWA 423

  Fly   402 ----PISKIFFLLRFGLDDN----APAQLEVV----SRALSNLFYNETDEVLLDHVHDNAYCHWQ 454
                |..::...||..||||    ..|.::|:    |.:|:..|:|                   
plant   424 YALGPEPELVLALRMALDDNHASVVIACVKVIQCLLSCSLNENFFN------------------- 469

  Fly   455 PTLEVLGNGSDGNGEDTDTNSI---------AFLQ----RYMKLLTTSKSVRAEV-DEDESESRT 505
             .||.:|    .:|:|..|.|:         .||:    :|....:...:.|.|: |:...::.|
plant   470 -ILENMG----PHGKDIFTASVFRSKPEIDLGFLRGCYWKYSAKPSNIVAFREEILDDGTEDTDT 529

  Fly   506 SMDDFQLAETDLMDCLLRTNILQRIRFILVSVKPDNSTVESCLKLLIRIARTSTKVARQLANESH 570
            ...|..:|..|:...|:|.:||.|| :.|:..:|..:..:|.:.:.|.|||.|.|....:.....
plant   530 IQKDVFVAGQDVAAGLVRMDILPRI-YHLLETEPTAALEDSIISVTIAIARHSPKCTTAILKYPK 593

  Fly   571 LIDTLFKHF-------LPSSSGSNQFYGQPQVLFLKLIRVLICHH----LDIAKGISKGVLITRL 624
            .:.|:.|.|       :.||          |:..::|::||..:.    ::..|..:...:...|
plant   594 FVQTIVKRFQLNKRMDVLSS----------QINSVRLLKVLARYDQSTCMEFVKNGTFNAVTWHL 648

  Fly   625 QQYLFLQDNKVQMVR--------IQIEALRILRCLLLLG-IVDRDIFRQFLPALRQLLDWHGNHC 680
            .|:....|:.|::.:        :.:|.||..:..:..| .|.|  |.:..|||...|.     |
plant   649 FQFTSSLDSWVKLGKQNCKLSSTLMVEQLRFWKVCIHSGCCVSR--FPELFPALCLWLS-----C 706

  Fly   681 -AFDGVGGSGLVRQ------HAAALLVAL-----------VASGESGACDVEGQKLLVEPLNNCC 727
             :|:.:....|:.:      .|..:|.|.           :...|||..|..    .|.|:.:..
plant   707 PSFEKLREKNLISEFTSVSNEAYLVLEAFAETLPNMYSQNIPRNESGTWDWS----YVSPMIDSA 767

  Fly   728 CGWMHAASRVAK----IKDFSQMTLLSAALYAVGWFSRNSLL------GTTSFLPFLRSILPK-- 780
            ..|:..|.::.|    |:..|..|.....||:....:.:.:|      |....||:|...:||  
plant   768 LSWITLAPQLLKWEKGIESVSVSTTTLLWLYSGVMRTISKVLEKISAEGEEEPLPWLPEFVPKIG 832

  Fly   781 ----------------------------FVQSSGF--------------IACVHDLVKGSIMLRR 803
                                        |::...|              :.|:|.|.:..:.::.
plant   833 LAIIKHKLLSFSVADVSRFGKDSSRCSSFMEYLCFLRERSQDDELALASVNCLHGLTRTIVSIQN 897

  Fly   804 PIDRRHVHAPLPNVGAVLMHDYGPQLVVSETYPVHLLSNLWALLAISLD--SGEKPLFEAL---- 862
            .|:........|:..::   ..|.:.|::.......|:.|.::.....|  |.|.|:.:::    
plant   898 LIESARSKMKAPHQVSI---STGDESVLANGILAESLAELTSVSCSFRDSVSSEWPIVQSIELHK 959

  Fly   863 ---IQPAV----------LEPLAEYLRQ-----LSTQLNRVLATNFFARSELRFIHQ-------- 901
               :.|.|          .......|.|     ||..||..|:.:...:..:.|:.:        
plant   960 RGGLAPGVGLGWGASGGGFWSTRVLLAQAGAGLLSLFLNISLSDSQNDQGSVGFMDKVNSALAMC 1024

  Fly   902 --------LLTTDGIEIYLKRQQMLQLVYNYLCCLSTAHATQIKSI-FERFIFNGDFVKLDESSL 957
                    ||.....| |:.|...|:   :..||:.    :..|:| ||.....||:.::  ||:
plant  1025 LIAGPRDYLLVERAFE-YVLRPHALE---HLACCIK----SNKKNISFEWECSEGDYHRM--SSM 1079

  Fly   958 -------KLLQQS-----------------CLEMVYPHIIADNS--------EPSLSLSYTQAPI 990
                   :.|||.                 .||.::......||        ..::..::.:.| 
plant  1080 LASHFRHRWLQQKGRSIAEEGVSGVRKGTVGLETIHEDGEMSNSSTQDKKSDSSTIEWAHQRMP- 1143

  Fly   991 LPTDWPFFQLRVILSNYLQNVQQRPAAIHSENQVVLMTLTFVRQLEREGLQIVSPLEKLMYLMIA 1055
            ||..|           :|..:    :|:||                  |.....|.|....|.:|
plant  1144 LPPHW-----------FLSAI----SAVHS------------------GKTSTGPPESTELLEVA 1175

  Fly  1056 FMG----------------PDSQFLAP---DLHELLRDCL--MDFYRE-NAAHEFDFDAEL---- 1094
            ..|                |......|   ..|.|....|  ||...: |..:.:::..||    
plant  1176 KAGVFFLAGLESSSGFGSLPSPVVSVPLVWKFHALSTVLLVGMDIIEDKNTRNLYNYLQELYGQF 1240

  Fly  1095 VDKAR------------------FEPLYYLFVEHFEAASYGDELFSSLVLVPLAQKYDNKWRRRL 1141
            :|:||                  :.....:.||.:.|.||||.::...|.|.|.|..::..|...
plant  1241 LDEARLNHRDTELLRFKSDIHENYSTFLEMVVEQYAAVSYGDVVYGRQVSVYLHQCVEHSVRLSA 1305

  Fly  1142 WSEHVQAVRFINCDESM--LMGGLFAYLEPVEEEPSLVKLY-----GDALAQKMVRPGSIAYRIA 1199
            |:. :...|.:....|:  .:|....|||||||..::::.|     ..||.:...| ||:||.:.
plant  1306 WTV-LSNARVLELLPSLDKCLGEADGYLEPVEENEAVLEAYLKSWTCGALDRAATR-GSVAYTLV 1368

  Fly  1200 QHHFN 1204
            .|||:
plant  1369 VHHFS 1373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG32104NP_648573.2 RPAP1_N 193..234 CDD:285785 14/58 (24%)
RPAP1_C 319..390 CDD:285784 16/70 (23%)
IYONP_195557.2 RPAP1_N 210..254 CDD:370008 12/49 (24%)
RPAP1_C 318..396 CDD:370007 27/118 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4732
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 88 1.000 Inparanoid score I2300
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D25908at2759
OrthoFinder 1 1.000 - - FOG0005659
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.960

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