Sequence 1: | NP_648573.2 | Gene: | CG32104 / 39413 | FlyBaseID: | FBgn0052104 | Length: | 1215 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001029171.1 | Gene: | Rpap1 / 311338 | RGDID: | 1590891 | Length: | 1400 | Species: | Rattus norvegicus |
Alignment Length: | 1467 | Identity: | 361/1467 - (24%) |
---|---|---|---|
Similarity: | 548/1467 - (37%) | Gaps: | 411/1467 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MFKKLKPGESEEDVLRMAAEFNAERAKDPNFQPAAAFVRMDKAPKKSMFAQRREQAKLGRVTSTT 65
Fly 66 EKNEEQIQP------VPKEIIPQIPTSV---------------------PKER----GSHVSQVL 99
Fly 100 LDEIQENILGDVKGSKMDPSSLGNVLGELVERTEGTRRSAFP---------ETKNVDSSKPLSIF 155
Fly 156 AKQLLGAKSS------------------------TKEKSNKVSDFPRNDTSSIIKDAKLGKEL-- 194
Fly 195 ----------HQENLNVLKQMNEQDILTEKERLLASLDPSLIALL-----SKKRQTTPNSKPPNP 244
Fly 245 NSPKVIEAPPMPAQST---------RAQDPQISSLTDGNPAIELLQESDKGNWLNFNLVEEHKLA 300
Fly 301 WMRDIPAKISELKPGEQFNARFDWKGVLLPHTLKDQDASKQIDERELYLHGEEADRPGYALQELF 365
Fly 366 RLARSTVLQQRLSAFGAIAGIFSIYNQG-FYDQ----VLSLPISKIF-FLLRFGLDDNAPAQLEV 424
Fly 425 VSRALSNLFYNETDEVLLDHVHDNAYCHWQPTLEVLGNGSDGNGEDTDTNSIAFLQRYMKLLTTS 489
Fly 490 KSVRAEVDEDESESRTSMDDFQLAETDLMDCLLRTNILQRIRFILVSVKPDNSTVESCLKLLIRI 554
Fly 555 ARTSTKVARQLANESHLIDTLFKHFLPSS------SGSNQFYGQPQVLFLKLIRVLICHHLDI-A 612
Fly 613 KGISKGVLITRLQQY-------LFLQDNKVQMVRIQIEALRILRCLLLLGIVDRDIFRQFLPALR 670
Fly 671 QLLDWHGNHCAFDGVGGSGLVRQHAAALLVAL------------VASGESGAC-----------D 712
Fly 713 VEGQKLLVE--------------------PLNNCC-----------------C--GWMHAASRVA 738
Fly 739 ------------------KIKDFSQM-TLLSAA-----------LYAVGWFSRNSLLGTTSFLPF 773
Fly 774 LRSILPKFVQSSGFIACVHDLVKG-----SIMLRRPIDRRH-----VHAPLPNV----GAVLMHD 824
Fly 825 YGPQLVVSETYPVHLLSNLWALLAISLDSGEKPLFEALIQPAVLEPLAEYLRQLSTQLNRVLATN 889
Fly 890 FFAR----SELRFIHQLLT----------------------TDGIEI------YLKR-------- 914
Fly 915 QQMLQLVYNYLCCLSTAHATQIKSIFERFIFNGDFVKLDESSLKLLQQSCLEMVYPHIIADNSEP 979
Fly 980 SLSLSYTQAPILPTDWPFFQLRVILSNYLQNVQQRPAAIHSENQV--VLMTLTFVRQLER---EG 1039
Fly 1040 LQIVSPLEKLMYLMIAFMGPDSQFLAPDLHELLRDCLMDFYRENAAHEFDFDAELVDKARFEPLY 1104
Fly 1105 YLFVEHFEAASYGDELFSSLVLVPLAQKYDNKWRRRLWSEHVQAVRFINCDESMLMGGLFAYLEP 1169
Fly 1170 VEEEPSLVKLYGDALAQKMV--RPGSIAYRIAQHHFN 1204 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG32104 | NP_648573.2 | RPAP1_N | 193..234 | CDD:285785 | 19/57 (33%) |
RPAP1_C | 319..390 | CDD:285784 | 31/70 (44%) | ||
Rpap1 | NP_001029171.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 35..54 | 5/38 (13%) | |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 60..95 | 4/34 (12%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 161..215 | 7/53 (13%) | |||
RPAP1_N | 226..270 | CDD:285785 | 18/43 (42%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 269..310 | 9/40 (23%) | |||
RPAP1_C | 364..429 | CDD:285784 | 31/70 (44%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 504..539 | 12/51 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166348811 | |
Domainoid | 1 | 1.000 | 169 | 1.000 | Domainoid score | I3700 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1894 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 267 | 1.000 | Inparanoid score | I2965 |
OMA | 1 | 1.010 | - | - | QHG52889 | |
OrthoDB | 1 | 1.010 | - | - | D25908at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0005659 | |
OrthoInspector | 1 | 1.000 | - | - | oto97862 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_104902 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR21483 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X6091 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
15 | 14.770 |