DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ncc69 and Slc12a6

DIOPT Version :10

Sequence 1:NP_001261758.1 Gene:Ncc69 / 39410 FlyBaseID:FBgn0036279 Length:1207 Species:Drosophila melanogaster
Sequence 2:NP_001103100.1 Gene:Slc12a6 / 691209 RGDID:1311335 Length:1150 Species:Rattus norvegicus


Alignment Length:1338 Identity:329/1338 - (24%)
Similarity:530/1338 - (39%) Gaps:425/1338 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 DATQMLNQRQPRQQRQSIKSSFRDKDKPSRFKDLQTTT----RFQVDPQN----------EESDE 128
            |.:..|:.|...:.|.|.:.|..:..:.....:|...|    ...:||.:          |:.::
  Rat    30 DTSPDLSSRSSSRVRFSSRESVPETSRSEPMSELSGATTSLATVALDPSSDRTSNPQDVTEDPNQ 94

  Fly   129 SNDSQEERELLDN----------------EYDTKYGKSFRHFTRE---------ALPRLDNYRNM 168
            ::.:.|..:|||:                |.|..:.|:...|..|         .|.|:.||.|:
  Rat    95 NSITGEHSQLLDDGHKKARNAYLNNSNYEEGDEYFDKNLALFEEEMDTRPKVSSLLNRMANYTNL 159

  Fly   169 MSIQAAYRPTLDELHNATLVGKNTHSLTRNQDPESGILNGVLKFGWIKGVLVRCLLNIWGVMLFL 233
              .|.|...  :|..|.| .||...:    :.|:         .|...||.:.||.||:||:|||
  Rat   160 --TQGAKEH--EEAENIT-EGKKKPT----KSPQ---------MGTFMGVYLPCLQNIFGVILFL 206

  Fly   234 RLSWVVGQAGVIEGFVLILTTTAVTTITALSMSAISTNGVIKGGGTYYMISRSLGPEFGGSIGLI 298
            ||:||||.|||::.|.::|.....|.:||:|||||:||||:..||:|:||||:|||||||::||.
  Rat   207 RLTWVVGTAGVLQAFAIVLICCCCTMLTAISMSAIATNGVVPAGGSYFMISRALGPEFGGAVGLC 271

  Fly   299 FSLANAVACAMYVVGFCESML--------------------AMMTTFGWEIIDGGVQDVRIIGCI 343
            |.|....|.|||::|..|..|                    ||:            .::|:.|..
  Rat   272 FYLGTTFAAAMYILGAIEIFLVYIVPRAAIFRSDDALKESAAML------------NNMRVYGTA 324

  Fly   344 TILLLLIIVVVGMEWE---AKAQIGLLIILLVAIGDFVIGSFIGP-------------------- 385
            .::|::::|.:|:.:.   |...:..:|:.::||....|.|...|                    
  Rat   325 FLVLMVLVVFIGVRYVNKFASLFLACVIVSILAIYAGAIKSSFAPPHFPVCMLGNRTLSSRHLDI 389

  Fly   386 ------------------------------------KSDAEMAKGFLGYNATLFKNNLFADYRP- 413
                                                .::....:|..|..:.:...||:::|.| 
  Rat   390 CSKTKEVNNMTIPSKLWGFFCNSSQFFNATCDEYFVHNNVTSIQGIPGLASGIITENLWSNYLPK 454

  Fly   414 ----EK---------GGIQHD---------FFSVFAIFFPAATGILAGANISGDLKDPQKSIPKG 456
                ||         |.:.|:         |..:..||||:.|||:||:|.||||||.|||||.|
  Rat   455 GEIIEKPSAKSSDVLGNLNHEYVLADITTSFTLLVGIFFPSVTGIMAGSNRSGDLKDAQKSIPIG 519

  Fly   457 TILAIVITTGTYLIMVLQCGA----TVARDATGNLSDVVNGTFAFLDCQPGECNYGLQNSFQVIE 517
            |||||:.|:..||..|:..||    .|.||..|   |.|.|..                   |:.
  Rat   520 TILAILTTSFVYLSNVVLFGACIEGVVLRDKFG---DAVKGNL-------------------VVG 562

  Fly   518 LVSAFGP-LIYAGCYAATLSSALASLVSAPKVFQALCKDELYPKIVWFAKGYGK-NNEPVRGYVL 580
            .:|...| :|..|.:.:|..:.|.||..||::.||:.||.:.|.:..|  |:.| |.||....:|
  Rat   563 TLSWPSPWVIVIGSFFSTCGAGLQSLTGAPRLLQAIAKDNIIPFLRVF--GHSKANGEPTWALLL 625

  Fly   581 TFIIACAFILIGELNLIAPLISNFFLAAYMLINFSTFHASLAKPVGWRPTFKYYNMWLSLLGAIL 645
            |..||...|||..|:|:||::|.|||..|:.:|.:....:|.:...|||.|:||:..||.:|..:
  Rat   626 TAAIAELGILIASLDLVAPILSMFFLMCYLFVNLACALQTLLRTPHWRPRFRYYHWALSFMGMSI 690

  Fly   646 CVAVMFLISWATALITFAAVLALYLIVAYRKPDVNWGSTTQAQTYKNALMSVQQLNNVEEHVKNY 710
            |:|:||:.||..|::.......:|..:.|:..:..||...:..:...|..::.:|.....|.||:
  Rat   691 CLALMFISSWYYAIVAMVIAGMIYKYIEYQGAEKEWGDGIRGLSLSAARFALLRLEEGPPHTKNW 755

  Fly   711 RPQILVLSGLPN----TRPVLVDLAYMLTKNLSLLVCGHVLKGSSSQKYRTYL--QERAGNWFRK 769
            |||:|||..|..    ..|.|:..|..|.....|.:.|.|:.|:..:.|...|  ::...:....
  Rat   756 RPQLLVLLKLDEDLHVKHPRLLTFASQLKAGKGLTIVGSVIVGNFLENYGDALAAEQTIKHLMEA 820

  Fly   770 HRVKGFYALVDGEDFESGTRALMQATGIGKLKPNIILMGYKTDWQTCDHKELDQYFNVMHKALDM 834
            .:||||..||.....:.|...|:|:.|:|.:|.|.::||:...|:.                   
  Rat   821 EKVKGFCQLVVAAKLKEGISHLIQSCGLGGMKHNTVVMGWPNGWRQ------------------- 866

  Fly   835 YLSVAILRVPQGLDCSQVLGSQD--GWKTVSDVPRTLQPNESSGDLQAVDSSVRNGLSGSIDSLS 897
                                |:|  .|||.....|                              
  Rat   867 --------------------SEDARAWKTFIGTVR------------------------------ 881

  Fly   898 RNVSQEDRNRNQLVHSEQNSLKIVKLRFKQGLRRMRSWPGAASSTSDLSFIAGNQSKDVSGMPDP 962
                                                     .::.:.|:.:.   :|:||..|  
  Rat   882 -----------------------------------------VTTAAHLALLV---AKNVSFFP-- 900

  Fly   963 LDAKSANLVSNSLRKSKLKHDDPASLYKGPGGAELPKEVLADLTQFTRKRSHAVIDVWWLYDDGG 1027
                                                    :::.||    |...|||||:..|||
  Rat   901 ----------------------------------------SNVEQF----SEGNIDVWWIVHDGG 921

  Fly  1028 LTLLLPYIISTRRTWQSCKLRVYALANKNSELEFEQRSMASLLSKFRIDY---------SDL--- 1080
            :.:|||:::...:.|:.|.:|::.:|.........::.:|:.|...||:.         ||:   
  Rat   922 MLMLLPFLLKQHKVWRKCSIRIFTVAQLEDNSIQMKKDLATFLYHLRIEAEVEVVEMHDSDISAY 986

  Fly  1081 ----TLIPD----------ITKKPQETSTQFFNELIKD--------FVVTEKDGENGT---SSRA 1120
                ||:.:          ::|..::...|    |:||        .:.:::|.|..|   ....
  Rat   987 TYERTLMMEQRSQMLRHMRLSKTERDREAQ----LVKDRNSMLRLTSIGSDEDEETETYQEKVHM 1047

  Fly  1121 TLNEDDALITD----------DDLLAVQ-DKTN-----RYLRLREYLREQSTKSDLVVMTLPMPR 1169
            |..:|..:.:.          .|||.:: |::|     ..::|.|.:..:|.::.||::.:|.|.
  Rat  1048 TWTKDKYMASRGQKVKSMEGFQDLLNMRPDQSNVRRMHTAVKLNEVIVNKSHEAKLVLLNMPGPP 1112

  Fly  1170 KNIVSAPLYMAWLESLSRDMPPFLFVRGNQTSVLTFYS 1207
            :|......||.:||.|:..:...|.|||..:.|:|.||
  Rat  1113 RNPEGDENYMEFLEVLTEGLERVLLVRGGGSEVITIYS 1150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ncc69NP_001261758.1 AA_permease_2 155..1207 CDD:459263 308/1229 (25%)
Slc12a6NP_001103100.1 2a30 109..1150 CDD:273347 312/1257 (25%)

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