DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ncc69 and Slc12a4

DIOPT Version :9

Sequence 1:NP_001261758.1 Gene:Ncc69 / 39410 FlyBaseID:FBgn0036279 Length:1207 Species:Drosophila melanogaster
Sequence 2:NP_062102.1 Gene:Slc12a4 / 29501 RGDID:3687 Length:1085 Species:Rattus norvegicus


Alignment Length:1268 Identity:313/1268 - (24%)
Similarity:493/1268 - (38%) Gaps:397/1268 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 QNEESDESNDSQEERELLD-------NEYDTKYGKSFRHFTREALPRLDNYRNMMSIQAAYRPTL 179
            :.|:||...:.:|....|.       |:|   |.::...|..|    ||           .||.:
  Rat    33 EREDSDGQGNHRENSPFLSPLDASRGNDY---YDRNLALFEEE----LD-----------IRPKV 79

  Fly   180 DELHNATLVGK------NTHSLTRNQDPESGILNG-------VLKFGWIKGVLVRCLLNIWGVML 231
                 ::|:||      .|.....:::.|||  .|       ....|.:.||.:.||.||:||:|
  Rat    80 -----SSLLGKLVSYTNLTQGAKEHEEAESG--EGGRRRAAKAPSMGTLMGVYLPCLQNIFGVIL 137

  Fly   232 FLRLSWVVGQAGVIEGFVLILTTTAVTTITALSMSAISTNGVIKGGGTYYMISRSLGPEFGGSIG 296
            ||||:|:||.|||::..:::|.....|.:||:|||||:||||:..||:|:||||||||||||::|
  Rat   138 FLRLTWMVGTAGVLQALLIVLICCCCTLLTAISMSAIATNGVVPAGGSYFMISRSLGPEFGGAVG 202

  Fly   297 LIFSLANAVACAMYVVGFCESMLAMMTTFGWEIIDGGVQD--------VRIIGCITILLLLIIVV 353
            |.|.|....|.|||::|..|.:|..:..........|..|        :|:.|.|.:..:.::|.
  Rat   203 LCFYLGTTFAAAMYILGAIEILLTYIAPPAAIFYPSGTHDMSSATLNNMRVYGTIFLTFMTLVVF 267

  Fly   354 VGMEWEAKAQIGLLIILLVAIGDFVIGS-------------FIG--------------------- 384
            ||:::..|.....|..::::|....:|.             .:|                     
  Rat   268 VGVKYVNKFASLFLACVIISILSIYVGGIKSAFDPPVFPVCMLGNRTLSRDQFDICAKTVVVDNE 332

  Fly   385 -------------PKSDAEMA------------KGFLGYNATLFKNNLFADYRPEKGGI--QH-- 420
                         |...|:..            .|..|..|.:.:.||::.|. |||.:  :|  
  Rat   333 TVATRLWTFFCHSPNLTADSCDPYFLLNNVTEIPGIPGAAAGVLQENLWSAYL-EKGEVVEKHGL 396

  Fly   421 ----------------------DFFSVFAIFFPAATGILAGANISGDLKDPQKSIPKGTILAIVI 463
                                  .|..:..||||:.|||:||:|.||||:|.|||||.|||||||.
  Rat   397 PSTDTLGLKESLSLYVVADIATSFTVLVGIFFPSVTGIMAGSNRSGDLRDAQKSIPVGTILAIVT 461

  Fly   464 TTGTYLIMVLQCGA----TVARDATGN--LSDVVNGTFAFLDCQPGECNYGLQNSFQVIELVSAF 522
            |:..|...|:..||    .|.||..|:  ..::|.||.|:                         
  Rat   462 TSLVYFSSVILFGACIEGVVLRDKYGDGVSRNLVVGTLAW------------------------- 501

  Fly   523 GP---LIYAGCYAATLSSALASLVSAPKVFQALCKDELYPKIVWFAKGYGK-NNEPVRGYVLTFI 583
             |   :|..|.:.:|..:.|.||..||::.||:.||.:.|.:..|  |:|| |.||....:||.:
  Rat   502 -PSPWVIVVGSFFSTCGAGLQSLTGAPRLLQAIAKDNIIPFLRVF--GHGKANGEPTWALLLTAL 563

  Fly   584 IACAFILIGELNLIAPLISNFFLAAYMLINFSTFHASLAKPVGWRPTFKYYNMWLSLLGAILCVA 648
            ||...|||..|:::||::|.|||..|:.:|.:....:|.:...|||.||||:..||.||..||:|
  Rat   564 IAELGILIASLDMVAPILSMFFLMCYLFVNLACAVQTLLRTPNWRPRFKYYHWALSFLGMSLCLA 628

  Fly   649 VMFLISWATALITFAAVLALYLIVAYRKPDVNWGSTTQAQTYKNALMSVQQLNNVEEHVKNYRPQ 713
            :||:.||..||:.......:|..:.|:..:..||...:..:...|..::.:|.....|.||:|||
  Rat   629 LMFVSSWYYALVAMVIAGMIYKYIEYQGAEKEWGDGIRGLSLSAARYALLRLEEGPPHTKNWRPQ 693

  Fly   714 ILVLSGLPN----TRPVLVDLAYMLTKNLSLLVCGHVLKGSSSQKY--RTYLQERAGNWFRKHRV 772
            :|||..|..    ..|.|:..|..|.....|.:.|.|::||..:.|  ....::...|.....:|
  Rat   694 LLVLLKLDEDLHVKYPRLLTFASQLKAGKGLTIVGSVIQGSFLESYGEAQAAEQTIKNMMEIEKV 758

  Fly   773 KGFYALVDGEDFESGTRALMQATGIGKLKPNIILMGYKTDWQTCDHKELDQYFNVMHKALDMYLS 837
            |||..:|.......|...|:|:.|:|.::.|.:::|:...|:.                      
  Rat   759 KGFCQVVVASKVREGLAHLIQSCGLGGMRHNSVVLGWPYGWRQ---------------------- 801

  Fly   838 VAILRVPQGLDCSQVLGSQD--GWKTVSDVPRTLQPNESSGDLQAVDSSVRNGLSGSIDSLSRNV 900
                             |:|  .|||..|..|                                 
  Rat   802 -----------------SEDPRAWKTFIDTVR--------------------------------- 816

  Fly   901 SQEDRNRNQLVHSEQNSLKIVKLRFKQGLRRMRSWPGAASSTSDLSFIAGNQSKDVSGMPDPLDA 965
                     ...:...:|.:.|                     :::|...|..:.:.|       
  Rat   817 ---------CTTAAHLALLVPK---------------------NIAFYPSNHERYLEG------- 844

  Fly   966 KSANLVSNSLRKSKLKHDDPASLYKGPGGAELPKEVLADLTQFTRKRSHAVIDVWWLYDDGGLTL 1030
                                                            |  |||||:..|||:.:
  Rat   845 ------------------------------------------------H--IDVWWIVHDGGMLM 859

  Fly  1031 LLPYIISTRRTWQSCKLRVYALANKNSELEFEQRSMASLLSKFRID---------YSDLTLIPDI 1086
            |||:::...:.|:.|::|::.:|..:......::.:|..|...|::         .||::.....
  Rat   860 LLPFLLRQHKVWKKCRMRIFTVAQMDDNSIQMKKDLAIFLYHLRLEAEVEVVEMHNSDISAYTYE 924

  Fly  1087 TKKPQETSTQFFNELIKDFVVTEKDGE----NGTSSRATL-----NEDDALITDDDLLAVQDKTN 1142
            .....|..:|...::  ....||:|.|    ....|...|     :|:|..:|..|.:.:....:
  Rat   925 RTLMMEQRSQMLRQM--RLTKTERDREAQLVKDRHSALRLESLYSDEEDESVTGADKIQMTWTRD 987

  Fly  1143 RYL---------------------------------RLREYLREQSTKSDLVVMTLPMPRKNIVS 1174
            :|:                                 :|.|.:..:|..:.||::.:|.|.||...
  Rat   988 KYMAEPWDPSHAPDNFRELVHIKPDQSNVRRMHTAVKLNEVIVTRSHDARLVLLNMPGPPKNSEG 1052

  Fly  1175 APLYMAWLESLSRDMPPFLFVRGNQTSVLTFYS 1207
            ...||.:||.|:..:...|.|||....|:|.||
  Rat  1053 DENYMEFLEVLTEGLERVLLVRGGGREVITIYS 1085

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ncc69NP_001261758.1 AA_permease_N 144..>183 CDD:285588 7/38 (18%)
2a30 155..1207 CDD:273347 302/1226 (25%)
ArsB_NhaD_permease <524..>682 CDD:304373 60/161 (37%)
SLC12 724..1207 CDD:281515 90/537 (17%)
Slc12a4NP_062102.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 32..56 5/22 (23%)
2a30 42..1085 CDD:273347 308/1257 (25%)
SLC5-6-like_sbd 142..>303 CDD:294310 57/160 (36%)
SLC12 709..1085 CDD:281515 90/536 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352207
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57166
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.850

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