DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ncc69 and kcc-2

DIOPT Version :9

Sequence 1:NP_001261758.1 Gene:Ncc69 / 39410 FlyBaseID:FBgn0036279 Length:1207 Species:Drosophila melanogaster
Sequence 2:NP_001255279.2 Gene:kcc-2 / 177370 WormBaseID:WBGene00019205 Length:1129 Species:Caenorhabditis elegans


Alignment Length:1394 Identity:322/1394 - (23%)
Similarity:537/1394 - (38%) Gaps:474/1394 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 RFQVNPVNGNSRKSQGADGPGSGSGAGAGAGAGAGEDGPHEVYRRLTNAEGELLEDDTFDATQML 83
            ||:|..|         |||.|.|:|:     .||                    .|...|:...:
 Worm     5 RFRVQSV---------ADGGGGGAGS-----VGA--------------------LDSVSDSNLAV 35

  Fly    84 NQRQPRQQRQSIKSSFRD-KDKPSRFKDLQTTTRFQVD-------------PQNEESDESNDSQE 134
            |.    ..::.|.:...| :.:|:......|.|..:..             |.|...:...|...
 Worm    36 NS----ATKKEITNKAHDFEPEPTSSTSTNTVTSRRSSGGSGSGLGPASKKPPNMHINIPTDEGA 96

  Fly   135 ER----------ELLDNEYDT---KYGKSFRHFTREALPRLDNYRNMMSIQAAYRPTLDELHNAT 186
            ||          .|.:.:|||   |.|...|..:                          ::|||
 Worm    97 ERIPLCEQHSPLALYEQDYDTQGQKIGTMLRKLS--------------------------VYNAT 135

  Fly   187 LVGKNTHSLTRNQDPESGILNGVLKFGWIKGVLVRCLLNIWGVMLFLRLSWVVGQAGVIEGFVLI 251
                ...|:..::.|::    ...|.|.|.||.:.||.||:||:.|:||:|::|.|||.:.|.::
 Worm   136 ----EATSVEADEKPKA----AAAKMGTIMGVFLPCLQNIFGVLFFIRLAWIIGTAGVFQAFFVV 192

  Fly   252 LTTTAVTTITALSMSAISTNGVIKGGGTYYMISRSLGPEFGGSIGLIFSLANAVACAMYVVGFCE 316
            ||..:||.:|::|:|||:||||:..||.||||||:||||.||::|::|.|...:|.:||:.|..|
 Worm   193 LTCVSVTFLTSISLSAIATNGVVPSGGPYYMISRNLGPELGGAVGILFYLGTTIAASMYITGAIE 257

  Fly   317 SMLAMMTTFGWEIIDGGVQDVRIIGCITILLLLIIVVVGMEWEAKAQIGLLIILLVAIGDFVIGS 381
            .:|..:.... ::.|....:.|::|.:.:|:|.:||:.|:::..:..:.|:|::::.|...::|.
 Worm   258 ILLLYIYPQA-KLFDDIYHNFRVLGTVLLLILGLIVMAGVKFVNRCALPLVIVVILCILSAILGV 321

  Fly   382 F-----------------------------IGPKSDAE-MAKGFLGYNAT--------------- 401
            |                             :.|...|: :...|...|.|               
 Worm   322 FVRYDGSDSLKFCMVGDRPVDLSTYFEKTQVQPNCTADGLQDLFCSTNGTCDHYYDRMKNIKVWK 386

  Fly   402 -------------------LFKNNLFADY----------RPEKGGIQH-------------DFFS 424
                               :|.:||:..|          |.:||.:..             :|..
 Worm   387 SSGMPAIREERAIKGIASGVFFDNLWPKYLRAGEVLSKDRKDKGDLNRGGHPSYIYAESVTNFMI 451

  Fly   425 VFAIFFPAATGILAGANISGDLKDPQKSIPKGTILAIVITTGTYLIMVLQCGATVA--------- 480
            :..:|||:||||:||:|.||:|:|..||||.||:.|...::..||:.|:..||:|:         
 Worm   452 LVGVFFPSATGIMAGSNRSGNLRDAAKSIPLGTLAAQNFSSFIYLLGVVLFGASVSEMFIRDKYG 516

  Fly   481 RDATGNLSDVVNGTFAFLDCQPGECNYGLQNSFQVIELVSAFGPLIYAGCYAATLSSALASLVSA 545
            |.|.|.|.                          :.|:...|..:|..||:.:|..:.:.||..|
 Worm   517 RSAMGKLI--------------------------ISEISWPFPQVILFGCFMSTAGAGMQSLTGA 555

  Fly   546 PKVFQALCKDELYPKIVWFAKGYGK---NNEPVRGYVLTFIIACAFILIGELNLIAPLISNFFLA 607
            |::.||:..|::.|    |.|.:.|   ..||:|..:||..|....|||..:..|..||:.|||.
 Worm   556 PRLLQAIAADDVLP----FLKPFRKMDSRGEPIRAILLTLAICECGILIAVIENITALITQFFLM 616

  Fly   608 AYMLINFSTFHASLAKPVGWRPTFKYYNMWLSLLGAILCVAVMFLISWATALITFAAVLALYLIV 672
            .|:.:|.:....||.|..||||.|:|::..||::||||||||||:.:|..||........:|..:
 Worm   617 CYLGVNAACALQSLLKSPGWRPGFRYFHWSLSMIGAILCVAVMFISAWHFALFAIIIGAGVYKYI 681

  Fly   673 AYRKPDVNWGSTTQAQTYKNALMSVQQLNNVEEHVKNYRPQILVLSGLP-----NTRPVLVDLAY 732
            .|...:..||...:......|..::..|::..:|.:|:|||:|||:  |     ||..:| ....
 Worm   682 EYAGAEKEWGDGLRGLGLSAARFALLNLDDKPQHSRNWRPQLLVLA--PDVESANTNGIL-SFVS 743

  Fly   733 MLTKNLSLLVCGHVLKGSSSQKY--RTYLQERAGNWFRKHRVKGFYALVDGEDFESGTRALMQAT 795
            .|.....|.:..|.::|..:..|  ...:||:.....:|:::|||..::...:...|...|:|.:
 Worm   744 QLKAGKGLTLVAHCMEGEYADNYLKAQAVQEKLKAVVKKNKIKGFCDVLVTSNVIEGISCLVQTS 808

  Fly   796 GIGKLKPNIILMGYKTDWQTCDHKELDQYFNVMHKALDMYLSVAILRVPQGLDCSQVLGSQDGWK 860
            |:|.::.|.:::.:..||:                                        ::..| 
 Worm   809 GLGGMRHNTVVLSWPNDWK----------------------------------------AEQEW- 832

  Fly   861 TVSDVPRTLQPNESSGDLQAVDSSVRNGLSGSIDSLSRNVSQEDRNRNQLVHSEQNSLKIVKLRF 925
                                                                       :|..:|
 Worm   833 -----------------------------------------------------------VVANKF 838

  Fly   926 KQGLRRMRSWPGAASSTSDLSFIAGNQSKDVSGMPDPLDAKSANLVSNSLRKSKLKHDDPASLYK 990
            ...:|.:.:                              ||.|.:|.....|.      ||:..|
 Worm   839 VSAIRAISA------------------------------AKCAIMVPKYAEKF------PANGTK 867

  Fly   991 GPGGAELPKEVLADLTQFTRKRSHAVIDVWWLYDDGGLTLLLPYIISTRRTWQSCKLRVYALANK 1055
            ..|                      .|||||:..||||.:|||:::...:||::..:|::|:|  
 Worm   868 VSG----------------------FIDVWWVVHDGGLLMLLPFLLRQHKTWKNTTVRLFAIA-- 908

  Fly  1056 NSELEFEQRSMASLLSKF----RI------------DYSDLT------------LIPDITKKPQE 1092
              ::|.....|.:.|.||    ||            |.||.|            .:.::.|..::
 Worm   909 --QMEDNNVQMKTDLEKFLYHLRIDAAVNVIEMTDSDISDYTYERTMKMEERNQYLKNLNKSDRD 971

  Fly  1093 TSTQFFNELI--------------------KDFVVTEKDGENGTSSR--ATLNEDDALITDD-DL 1134
            ...|...|::                    ::..|.:::.|:|.|..  |.:.......:|| |.
 Worm   972 KDIQNHLEIVTRERKLSRINEEAPAVVPEQRNLEVVDEEQEDGKSENGSAKIEHKGVRFSDDEDS 1036

  Fly  1135 LAV-------------QDKTNRY--------LRLREYLREQSTKSDLVVMTLPMPRKNIVSAPLY 1178
            ..|             :.:..||        ::|.|.:|::|:.:.||.:.||.| .:..|...|
 Worm  1037 KEVKVGNGTLERDREERQRKRRYNVHKMHTAVKLNELMRQKSSDAQLVFVNLPGP-PDADSDSYY 1100

  Fly  1179 MAWLESLSRDMPPFLFVRGNQTSVLTFYS 1207
            |.::|:|:..:...|.|||....|:|.||
 Worm  1101 MDFIEALTEGLDRVLLVRGTGAEVVTIYS 1129

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ncc69NP_001261758.1 AA_permease_N 144..>183 CDD:285588 5/41 (12%)
2a30 155..1207 CDD:273347 288/1229 (23%)
ArsB_NhaD_permease <524..>682 CDD:304373 58/160 (36%)
SLC12 724..1207 CDD:281515 95/556 (17%)
kcc-2NP_001255279.2 2a30 144..1129 CDD:273347 284/1185 (24%)
SLC12 741..1129 CDD:281515 94/550 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57166
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.