DRSC/TRiP Functional Genomics Resources

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Protein Alignment CrzR and gnrr-5

DIOPT Version :10

Sequence 1:NP_001261755.1 Gene:CrzR / 39409 FlyBaseID:FBgn0036278 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_504228.2 Gene:gnrr-5 / 186759 WormBaseID:WBGene00019224 Length:423 Species:Caenorhabditis elegans


Alignment Length:421 Identity:105/421 - (24%)
Similarity:173/421 - (41%) Gaps:115/421 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 EQVPE-HVMDHAPQLSRSGLLKVYVLAVMALFSLLG--NLLTIWNIYKTRISRRNSR--HTWSAI 160
            |::.| |.:..|.::|....:|:.|...:.:|.:.|  ||:.:     :|..|..||  ...|.|
 Worm    11 EELQEAHALKEAEEISEILRIKIEVCIYVIVFFIGGPLNLMAL-----SRSLRAFSRTHKAKSQI 70

  Fly   161 YSLMFHLSIADVLVTWFCIIGEAAWCYTVQWLANELTCKLVKLFQMFSLYLSTYVLVLIGVDRWI 225
            ..|...|::||::..:..:..:..|..|.||...|..|:....|..||.||:::|:..|.:|| :
 Worm    71 LLLRITLNLADLMTLFLYVPKQIIWLITYQWYGGEFLCRACAFFSTFSFYLNSFVIACIAIDR-V 134

  Fly   226 AVKYPMKSLNMAK----RCHRLLGGTYILSLVLSLPQFFIFHVARGPFVE-EFYQCVT------- 278
            ...|.:.|||..:    ||..|||..::|:.:|||||..:| ....|:.. :|.||.|       
 Worm   135 FGAYNISSLNAHRKAYIRCRNLLGCGWVLAFLLSLPQAVVF-TTTSPYENIDFKQCATIFMIFLH 198

  Fly   279 ------HGFYTAD---------------WQEQMYATFTLVFTFLLPLCILFGTYM---------- 312
                  |...|.|               | |:|||....:|.|.:|..::.|:|:          
 Worm   199 EKRIEYHDPATTDIRREQIDEEAASMERW-EKMYAINHFLFVFWIPCIVIIGSYIVVLLILQGHL 262

  Fly   313 -----ST----FRTISS------------------------SEKMFQGSKLANYSTAKLPTQTNR 344
                 ||    ||..||                        .|:.|.....::|......:...|
 Worm   263 KQDKASTSCFNFRVKSSDIMTIDETQSTTTRSPTRSTYLLQQEESFALRSSSSYDFESHNSHPTR 327

  Fly   345 Q--------------------RLIHKAKMKSLRISVVIIIAFLICWTPYYVMMIMFMFLNPDKRL 389
            |                    ..||:||..:.|.:.:||:|:|..|:||.:..::.:|..|   :
 Worm   328 QGSIRSRASTGGGSKFGAMAVSTIHRAKQHAKRQAALIIVAYLCIWSPYNLFTVLNLFGMP---I 389

  Fly   390 GDDLQDAIFFFGMS---NSLVNPLIYGAFHL 417
            .::|:..:.|...:   |::|||:|||.|.:
 Worm   390 MEELRHFLSFLNAAICVNTVVNPIIYGVFSM 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CrzRNP_001261755.1 7tmA_GnRHR_invertebrate 119..419 CDD:320506 100/402 (25%)
TM helix 1 120..146 CDD:320506 6/27 (22%)
TM helix 2 160..187 CDD:320506 6/26 (23%)
TM helix 3 198..228 CDD:320506 10/29 (34%)
TM helix 4 239..260 CDD:320506 11/20 (55%)
TM helix 5 288..317 CDD:320506 12/47 (26%)
TM helix 6 350..380 CDD:320506 10/29 (34%)
TM helix 7 391..416 CDD:320506 9/27 (33%)
gnrr-5NP_504228.2 TM helix 3 109..131 CDD:320504 7/21 (33%)
TM helix 4 155..171 CDD:320504 7/15 (47%)
TM helix 5 229..252 CDD:320504 7/22 (32%)
TM helix 6 359..381 CDD:320504 8/21 (38%)
TM helix 7 391..419 CDD:320504 9/27 (33%)
7tm_GPCRs 35..420 CDD:475119 99/395 (25%)
TM helix 1 35..58 CDD:320504 6/27 (22%)
TM helix 2 71..94 CDD:320504 4/22 (18%)

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