DRSC/TRiP Functional Genomics Resources

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Protein Alignment CrzR and gnrr-1

DIOPT Version :10

Sequence 1:NP_001261755.1 Gene:CrzR / 39409 FlyBaseID:FBgn0036278 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_001249720.1 Gene:gnrr-1 / 186230 WormBaseID:WBGene00018798 Length:401 Species:Caenorhabditis elegans


Alignment Length:295 Identity:86/295 - (29%)
Similarity:156/295 - (52%) Gaps:7/295 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 VLAVMALFSLLGNLLTIWNIYKTRISRRNSRHTWSAIYSLMFHLSIADVLVTWFCIIGEAAWCYT 188
            ||:::..:..|..|..:.|:....|..||.......::||:.|::||.:|||...:..|....|.
 Worm    20 VLSIVFTYLALFILAFVGNVTMFLILCRNQLVKVRRVHSLLLHMNIAHLLVTLVVMPKEILHNYM 84

  Fly   189 VQWLANELTCKLVKLFQMFSLYLSTYVLVLIGVDRWIAVKYPMKSLNMAKRCHRLLGGTYILSLV 253
            |.|.|.::.|::.|.|.:|::.||..||:.|.:||:.::.:|:.::...|...|::...:.:|.|
 Worm    85 VAWFAGDVMCRICKFFDVFAISLSMNVLICITLDRFYSIFFPLYAMRARKSVQRMVSFAWTISFV 149

  Fly   254 LSLPQFFIFHVARGPFVEEFYQCVTHGFYTADWQEQMYATFTLV---FTFLLPLCILFGTYMSTF 315
            .|.||.::|..|..|..:.:.|||:..| ..:....:...|::|   ..::.||.:....|....
 Worm   150 TSAPQLYLFKTATHPCFDWYTQCVSKNF-IGELSNDVVFFFSIVNIIQVYIAPLFVTVVCYSLIL 213

  Fly   316 RTISSSEKMFQGSKLANYSTAKLPTQTNRQRLIHKAKMKSLRISVVIIIAFLICWTPYYVMMIMF 380
            ..||...|:. |.|.:..| ::|..:.|.|..:.|||.::|:::.||::||:.|||||.::|.:.
 Worm   214 WRISRKSKLV-GEKESEKS-SELLLRRNGQNNLEKAKSRTLKMTFVIVLAFIFCWTPYSILMFLH 276

  Fly   381 MFLNPDKRLGDDLQDAIFFFGMSNSLVNPLIYGAF 415
             ||.....:..|::..|:.|.:.||.::|.:||.|
 Worm   277 -FLRHTDWIPKDIRKFIYAFAVLNSAISPYLYGYF 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CrzRNP_001261755.1 7tmA_GnRHR_invertebrate 119..419 CDD:320506 86/295 (29%)
TM helix 1 120..146 CDD:320506 5/21 (24%)
TM helix 2 160..187 CDD:320506 9/26 (35%)
TM helix 3 198..228 CDD:320506 11/29 (38%)
TM helix 4 239..260 CDD:320506 6/20 (30%)
TM helix 5 288..317 CDD:320506 5/31 (16%)
TM helix 6 350..380 CDD:320506 14/29 (48%)
TM helix 7 391..416 CDD:320506 9/25 (36%)
gnrr-1NP_001249720.1 7tmA_AKHR 21..318 CDD:320504 85/294 (29%)
TM helix 1 22..48 CDD:320504 4/25 (16%)
TM helix 2 56..83 CDD:320504 9/26 (35%)
TM helix 3 94..124 CDD:320504 11/29 (38%)
TM helix 4 135..156 CDD:320504 6/20 (30%)
TM helix 5 186..215 CDD:320504 5/28 (18%)
TM helix 6 246..276 CDD:320504 14/29 (48%)
TM helix 7 286..311 CDD:320504 9/25 (36%)

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