DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CrzR and gnrr-7

DIOPT Version :10

Sequence 1:NP_001261755.1 Gene:CrzR / 39409 FlyBaseID:FBgn0036278 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_001379083.1 Gene:gnrr-7 / 184414 WormBaseID:WBGene00008737 Length:381 Species:Caenorhabditis elegans


Alignment Length:414 Identity:82/414 - (19%)
Similarity:171/414 - (41%) Gaps:100/414 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 LAHTNSRHEAPPMAEQVPEHVMDHAPQLSRSGLLKVYVLAVMALFSLLGNLLTIWNIYKTRISRR 151
            :..|::|     :::.|||.:..   :::.:.:|.:|.:|    :.::|.::.| .:|..|..:|
 Worm     1 MIETSTR-----ISQLVPERLWS---EVTEASILFIYDIA----YIIVGFIIAI-KLYNQRKVKR 52

  Fly   152 NSRHT-WSAIYS--LMFHLSI--ADVLVTWFCIIGEAAWCYTVQWLANELTCKLVKLFQMFSLYL 211
            ..:|. .|..::  |:|..|:  :|.::.:.....:|.|....:|....|.||:.:.:...:.:.
 Worm    53 PIQHNGQSGNHNSFLLFKTSLFASDCMIMFIYAAVKALWLLQFEWKYGSLWCKMYRYWSSVAFFS 117

  Fly   212 STYVLVLIGVDRWIAV-KYPMKSLNMAKRCHRLLGGTYILSLVLSLPQFFIFHVARGPFVEEFYQ 275
            ::.::..|.:||:::| ...:..:...:|..|:|...:|::|:.:|||..::...| |..|::.|
 Worm   118 NSNIVCGIALDRYLSVYSNHIIGVRQYQRTKRMLYAVWIIALIAALPQLIVWETYR-PSSEDWEQ 181

  Fly   276 CVTHGFYTADWQE---------------QMYATFTLVFTFLLPLCILFGTYM------------- 312
            |||  .:..|..:               .:|..:.....|.|||.|...:|:             
 Worm   182 CVT--VFAIDLHKLPLNSPKKDEINFCSMLYEGYHQAMAFWLPLSITIASYVRMMSRLIPFWPFT 244

  Fly   313 ----------STFRTI---SSSEK--------MFQGSKLANYSTAKLPTQTNRQRLIHKAKMKSL 356
                      .|..||   ..|||        :|:....|:..:.::|.....:.....|..:.|
 Worm   245 VLNHYEDERQQTLCTIFWSKISEKIRSFFCVTIFRRKSYASQQSVRVPLAETIRHPPTTALRRQL 309

  Fly   357 RISV-----VIIIAFLICWTPYYVMMIMFMFLNPD-----KRLGDDLQDAIFFFGMSNSLVNPLI 411
            ..:|     .||:..:|.|.||.::.:. .|:|..     .:.|.:|.:.:.   :.:|.:||::
 Worm   310 GTTVFKNACAIIVTHIILWLPYNIISLS-RFVNEGFYETISQNGGNLFELLI---LLSSFLNPIL 370

  Fly   412 YGAFHLCPGKGGKSSGGGGNNNAY 435
            |               .||.|.|:
 Worm   371 Y---------------SGGTNTAH 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CrzRNP_001261755.1 7tmA_GnRHR_invertebrate 119..419 CDD:320506 73/364 (20%)
TM helix 1 120..146 CDD:320506 6/25 (24%)
TM helix 2 160..187 CDD:320506 6/30 (20%)
TM helix 3 198..228 CDD:320506 6/30 (20%)
TM helix 4 239..260 CDD:320506 8/20 (40%)
TM helix 5 288..317 CDD:320506 8/66 (12%)
TM helix 6 350..380 CDD:320506 9/34 (26%)
TM helix 7 391..416 CDD:320506 5/24 (21%)
gnrr-7NP_001379083.1 7tm_GPCRs 24..371 CDD:475119 72/358 (20%)
TM helix 1 24..45 CDD:320504 5/25 (20%)
TM helix 2 64..90 CDD:320504 4/25 (16%)
TM helix 3 105..127 CDD:320504 2/21 (10%)
TM helix 4 149..165 CDD:320504 5/15 (33%)
TM helix 5 193..258 CDD:320504 8/64 (13%)
TM helix 6 309..336 CDD:320504 8/26 (31%)
TM helix 7 350..371 CDD:320504 5/23 (22%)

Return to query results.
Submit another query.