DRSC/TRiP Functional Genomics Resources

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Protein Alignment CrzR and gnrhr

DIOPT Version :9

Sequence 1:NP_001261755.1 Gene:CrzR / 39409 FlyBaseID:FBgn0036278 Length:644 Species:Drosophila melanogaster
Sequence 2:NP_001107549.1 Gene:gnrhr / 100135417 XenbaseID:XB-GENE-5753573 Length:410 Species:Xenopus tropicalis


Alignment Length:390 Identity:115/390 - (29%)
Similarity:194/390 - (49%) Gaps:49/390 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 PQLSRSGLLKVYVLAVMALFSLLGNLLTIWNI-YKTRISRRNSRHTWSAIYSLMFHLSIADVLVT 175
            |..|.:..::|.:..::.:||...|:..:|.| ||.|..        |.|..|:.:|..||:.:|
 Frog    41 PIFSTAAKIRVAITCILFVFSTCFNVAALWTITYKYRKK--------SHIRILIINLVAADLFIT 97

  Fly   176 WFCIIGEAAWCYTVQWLANELTCKLVKLFQMFSLYLSTYVLVLIGVDRWIAVKYPMKSLNMAKRC 240
            ...:..:|.|..|:||.|.:|.|:::...::.::|.|.:|.|:|.:||..||..|:...:..|:.
 Frog    98 LVVMPLDAVWNVTLQWYAGDLACRVLMFLKLAAMYSSAFVTVVISLDRQAAVLNPLGIRDAKKKN 162

  Fly   241 HRLLGGTYILSLVLSLPQFFIFHVARGPFVEEFYQCVTHGFYTADWQEQMYATFTLVFTFLLPLC 305
            ..:|...:.||.:|::||.|:||.........|.||.|.|.:.|.|||.:|..||....|||||.
 Frog   163 KIMLCVAWSLSYLLAIPQLFVFHTVSRSEPVHFVQCATVGSFQAHWQETIYNMFTFFCLFLLPLL 227

  Fly   306 ILFGTYMSTFRTISSSEKMFQGSKLANYSTAKLPTQTNRQRLIHKAKMKSLRISVVIIIAFLICW 370
            |:...|......|  :.||    |.|..|:.::..:.:... |.:|:|::|::|:||::.|::||
 Frog   228 IMVFCYARILMEI--THKM----KAACVSSKEIDLRRSSNN-IPRARMRTLKMSLVIVLTFIVCW 285

  Fly   371 TPYYVMMIMFMFLNPD----KRLGDDLQDAIFFFGMSNSLVNPLIYGAF---------HLCPGKG 422
            ||||::.|.:.| :|:    :::...|...:|.||:.|:.::|:|||.|         .:|    
 Frog   286 TPYYLLGIWYWF-SPEMLTKEKVPPSLSHILFLFGLLNTCLDPIIYGLFTIHFRREIRRVC---- 345

  Fly   423 GKSSGGGGNNNAYSLNRGD---SQRTPSMLTAV--------TQVDGTG---GSSRQMRAFRQQSY 473
             :.:..|.:::..||..|.   |..|..|..||        .:|.|.|   |...|.|....:|:
 Frog   346 -RCAAQGKDHDTASLGTGSFRISTTTVPMKRAVLGGSGKLELEVTGYGLHSGKCEQCRGKIMESF 409

  Fly   474  473
             Frog   410  409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CrzRNP_001261755.1 7tm_4 127..>260 CDD:304433 40/133 (30%)
7tm_1 135..412 CDD:278431 89/281 (32%)
gnrhrNP_001107549.1 7tmA_GnRHR_vertebrate 48..341 CDD:320505 96/308 (31%)
TM helix 1 50..74 CDD:320505 6/23 (26%)
TM helix 2 83..106 CDD:320505 5/22 (23%)
TM helix 3 121..143 CDD:320505 5/21 (24%)
TM helix 4 164..180 CDD:320505 4/15 (27%)
TM helix 5 211..234 CDD:320505 9/22 (41%)
TM helix 6 271..293 CDD:320505 11/21 (52%)
TM helix 7 309..334 CDD:320505 9/24 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D368588at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X690
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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