DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10418 and LSM2

DIOPT Version :10

Sequence 1:NP_648570.1 Gene:CG10418 / 39408 FlyBaseID:FBgn0036277 Length:95 Species:Drosophila melanogaster
Sequence 2:NP_563682.1 Gene:LSM2 / 839526 AraportID:AT1G03330 Length:93 Species:Arabidopsis thaliana


Alignment Length:90 Identity:70/90 - (77%)
Similarity:77/90 - (85%) Gaps:0/90 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLFYSFFKSLVGKEVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGS 65
            |||:|:||.|||:||.|||||||:|.||||||||||||||.:..|.|.|||||||||:|||||||
plant     1 MLFFSYFKDLVGQEVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNCFIRGS 65

  Fly    66 VVRYVQLPGDEVDTQLLQDAARKEA 90
            ||||||||.|.||..||.||||:||
plant    66 VVRYVQLPKDGVDVDLLHDAARREA 90

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10418NP_648570.1 LSm2 2..90 CDD:212472 67/87 (77%)
LSM2NP_563682.1 LSm2 2..90 CDD:212472 67/87 (77%)

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