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Protein Alignment CG10418 and snrpd3l
DIOPT Version :9
Sequence 1: | NP_648570.1 |
Gene: | CG10418 / 39408 |
FlyBaseID: | FBgn0036277 |
Length: | 95 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_956054.1 |
Gene: | snrpd3l / 327011 |
ZFINID: | ZDB-GENE-030131-5219 |
Length: | 128 |
Species: | Danio rerio |
Alignment Length: | 84 |
Identity: | 19/84 - (22%) |
Similarity: | 40/84 - (47%) |
Gaps: | 11/84 - (13%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 EVVVELKNDLSIC---------GTLHSVDQYLNIKLTDISVTDPDKYPHMLSVKNCFIRGSVVRY 69
:|:.|.:..:..| |.|...:..:|.::::|:||..| ..:..::..:||||.:|:
Zfish 8 KVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRD--GRVSQLEQVYIRGSKIRF 70
Fly 70 VQLPGDEVDTQLLQDAARK 88
:.||....:..:|:....|
Zfish 71 LILPDMLKNAPMLKSMKNK 89
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG10418 | NP_648570.1 |
LSm2 |
2..90 |
CDD:212472 |
19/84 (23%) |
snrpd3l | NP_956054.1 |
Sm_D3 |
6..75 |
CDD:212468 |
16/68 (24%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG1958 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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