powered by:
Protein Alignment CG10418 and Snrpd2l
DIOPT Version :9
Sequence 1: | NP_648570.1 |
Gene: | CG10418 / 39408 |
FlyBaseID: | FBgn0036277 |
Length: | 95 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_214847.2 |
Gene: | Snrpd2l / 292688 |
RGDID: | 1305065 |
Length: | 118 |
Species: | Rattus norvegicus |
Alignment Length: | 71 |
Identity: | 12/71 - (16%) |
Similarity: | 30/71 - (42%) |
Gaps: | 22/71 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 EVVVELKNDLSICGTLHSVDQYLNIKLTDI-----------------SVTDPDKYPHMLSVKNCF 61
:|::..:|:..:.|.:.:.|::.|:.|.:: ...:.|:| :...|
Rat 41 QVLINCRNNKKLLGRVKAFDRHCNMVLENVKEIWTEVPKSGKGKKKSKPVNKDRY-----ISKMF 100
Fly 62 IRGSVV 67
:||:.|
Rat 101 LRGNSV 106
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG10418 | NP_648570.1 |
LSm2 |
2..90 |
CDD:212472 |
12/71 (17%) |
Snrpd2l | XP_214847.2 |
Sm_D2 |
24..113 |
CDD:212467 |
12/71 (17%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG1958 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
Return to query results.
Submit another query.