DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10418 and LOC100360750

DIOPT Version :9

Sequence 1:NP_648570.1 Gene:CG10418 / 39408 FlyBaseID:FBgn0036277 Length:95 Species:Drosophila melanogaster
Sequence 2:XP_017454452.1 Gene:LOC100360750 / 100360750 RGDID:2321508 Length:80 Species:Rattus norvegicus


Alignment Length:69 Identity:24/69 - (34%)
Similarity:37/69 - (53%) Gaps:10/69 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 FFKSLVGKEVVVELKNDLSICGTLHSVDQYLNIKL--TDISVTD--PDKYPHMLSVKNCFIRGSV 66
            |.|.::|:.|||:|.:.:...|.|..:|.|:||.|  |:..|..  .:||      .:.||||:.
  Rat    11 FLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKY------GDAFIRGNN 69

  Fly    67 VRYV 70
            |.|:
  Rat    70 VLYI 73

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10418NP_648570.1 LSm2 2..90 CDD:212472 24/69 (35%)
LOC100360750XP_017454452.1 LSm6 7..74 CDD:212473 24/69 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1958
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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