Protein Alignment Lmx1a and LIMD1

DIOPT Version :9

• Sequence 1: NP_729801.1
• Gene: Lmx1a / 39406
• FlyBaseID: FBgn0052105
• Length: 640
• Species: Drosophila melanogaster
• Sequence 2: NP_055055.1
• Gene: LIMD1 / 8994
• HGNCID: 6612
• Length: 676
• Species: Homo sapiens
• Identity: / - (0%)
• Similarity: / - (0%)
• Gaps: / - (0%)

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lmx1a	NP_729801.1	LIM1_Lmx1b	275..327	CDD:188757
		LIM	333..388	CDD:295319
		Homeobox	427..480	CDD:278475
LIMD1	NP_055055.1	Mediates nuclear export	54..134
		Atrophin-1	<69..443	CDD:331285
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	104..163
		Interaction with EGLN1/PHD2	186..260
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	189..389
		Interaction with RB1. /evidence=ECO:0000269|PubMed:15542589	404..442
		Necessary for nuclear localization	472..676
		LIM1_Ajuba_like	472..525	CDD:188738
		LIM2_Ajuba_like	537..589	CDD:188741
		LIM3_Ajuba_like	597..658	CDD:188822

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
User_Submission	0	0.000	Not matched by this tool.
	1	0.910