Protein Alignment Lmx1a and AT4G36860

DIOPT Version :9

• Sequence 1: NP_729801.1
• Gene: Lmx1a / 39406
• FlyBaseID: FBgn0052105
• Length: 640
• Species: Drosophila melanogaster
• Sequence 2: NP_001328324.1
• Gene: AT4G36860 / 829839
• AraportID: AT4G36860
• Length: 577
• Species: Arabidopsis thaliana
• Alignment Length: 341
• Identity: 66/341 - (19%)
• Similarity: 120/341 - (35%)
• Gaps: 85/341 - (24%)

  Fly   274 LCEGCGQKI-HDRFLMNVGDANWHEQCLACCYCGMQ-LHHTCYVRNSKLYCKMDYDRLFGVKCSS 336
            :|.||..:| |.|||..:|.. ||.:|..|..|... :.:...:..::.|.|:.|......|| .
plant   213 ICVGCQAEIGHGRFLSCMGGV-WHPECFCCNACDKPIIDYEFSMSGNRPYHKLCYKEQHHPKC-D 275

  Fly   337 CCHAILPQE----LVMRPIPNFVFHLPCFV----------CYAC-RLPLQKGEQFMLRDGQLFCY 386
            .||..:|..    :..|..|   |.:..:.          |.:| |:..:..:..:|.||:..|.
plant   276 VCHNFIPTNPAGLIEYRAHP---FWMQKYCPSHERDGTPRCCSCERMEPKDTKYLILDDGRKLCL 337

  Fly   387 R---------HDLE------KEMF--LAAAAAQHCGFVGLDEEDLLRPRDGR----------RG- 423
            .         |:.:      :|.:  |.....|....:.::...|....:|.          ||
plant   338 ECLDSAIMDTHECQPLYLEIREFYEGLHMKVEQQIPMLLVERSALNEAMEGEKHGHHHLPETRGL 402

  Fly   424 -PKRPRTILTSQQRKQFKASF---DQSPKPCRKVREA-------------LAKDTGLSVRVVQVW 471
             ....:|:.|..:|.:..|.:   |...:|||.:|..             |...:.|:..::..|
plant   403 CLSEEQTVTTVLRRPRIGAGYKLIDMITEPCRLIRRCEVTAILILYGLPRLLTGSILAHEMMHAW 467

  Fly   472 -----FQNQRAKMKK--------IQRKAKQNGGS-----GGGSGSGRGTGNSSATDDKDTNDKED 518
                 :.|.|.::::        :..:::...||     ...|.|...:.:|...:..|...|..
plant   468 LRLNGYPNLRPEVEEGICQVLAHMWLESETYAGSTLVDIASSSSSAVVSASSKKGERSDFEKKLG 532

  Fly   519 KCVKQELGGDSSGYLG 534
            :..|.::..|||...|
plant   533 EFFKHQIESDSSSAYG 548

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lmx1a	NP_729801.1	LIM1_Lmx1b	275..327	CDD:188757	16/53 (30%)
		LIM	333..388	CDD:295319	15/78 (19%)
		Homeobox	427..480	CDD:278475	14/73 (19%)
AT4G36860	NP_001328324.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	47	0.796	Domainoid score	I4515
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.000