Protein Alignment Lmx1a and LOC799481

DIOPT Version :9

• Sequence 1: NP_729801.1
• Gene: Lmx1a / 39406
• FlyBaseID: FBgn0052105
• Length: 640
• Species: Drosophila melanogaster
• Sequence 2: XP_009302150.2
• Gene: LOC799481 / 799481
• -ID: -
• Length: 356
• Species: Danio rerio
• Alignment Length: 347
• Identity: 103/347 - (29%)
• Similarity: 144/347 - (41%)
• Gaps: 84/347 - (24%)

  Fly   238 NGGGAATASAAAASKLSADC-SGRTEVGHIKCEKNFELCEGCGQKIHDRFLMNVGDANWHEQCLA 301
            ||.....:.:|....:::|. .|:.            :|..|.:.|.||.|:.|.|..||.:||:
Zfish    60 NGRSDPASPSALPETMASDAFQGKA------------VCTRCREHILDRHLLKVNDMCWHARCLS 112

  Fly   302 CCYCGMQLHH--TCYVRNSKLYCKMDYDRLFGVKCSSCCHAILPQELVMRPIPNFVFHLPCFVCY 364
            |..|...|..  |||||..:::||:.|.|.|...||.|...:...:.|.|...| |:||.||.|:
Zfish   113 CSVCQTTLSEQTTCYVREREIFCKLHYFRRFQTWCSCCRETLHSSDWVHRAKGN-VYHLACFSCF 176

  Fly   365 ACRLPLQKGEQFMLRDGQLFC---YRHDLEK-------------EMFLAAAAAQHCGFVGLDEED 413
            :|:..|..||:|.|...:|.|   |...|:|             |..|||..           |.
Zfish   177 SCKRQLSTGEEFALVGEKLLCRIHYSSMLDKLNRPAEKGKSVSPEKALAAGC-----------EI 230

  Fly   414 LLRPRDGRRGPKRPRTILTSQQRKQFKASFDQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAK 478
            ..:|      .||.||..|:.|.:..:|.|.|...|..::.::||:.||||.||:||||||.||:
Zfish   231 KQKP------SKRARTSFTADQLQVMQAQFVQDNNPDAQMLQSLAEQTGLSRRVIQVWFQNCRAR 289

  Fly   479 MKKIQRKAKQNGGSGGGSGSGRGTGNSSATDDKDTNDKEDKCVKQELGGDSSGYLGGLDST---- 539
            .||             ...:....|.||.:.....|         ||....:..|.||.:|
Zfish   290 HKK-------------HVSTPHSAGLSSLSSTSTVN---------ELRYTETTLLTGLHNTCIHV 332

  Fly   540 -----FASQPL----NPNLPFS 552
                 ...|||    :.:||.|
Zfish   333 NTASSLLYQPLLYHQSTHLPIS 354

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lmx1a	NP_729801.1	LIM1_Lmx1b	275..327	CDD:188757	22/53 (42%)
		LIM	333..388	CDD:295319	21/57 (37%)
		Homeobox	427..480	CDD:278475	24/52 (46%)
LOC799481	XP_009302150.2	LIM	85..140	CDD:295319	22/54 (41%)
		LIM	147..201	CDD:295319	20/54 (37%)
		HOX	235..291	CDD:197696	26/55 (47%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910