DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lmx1a and ZFHX3

DIOPT Version :9

Sequence 1:NP_729801.1 Gene:Lmx1a / 39406 FlyBaseID:FBgn0052105 Length:640 Species:Drosophila melanogaster
Sequence 2:NP_001373664.1 Gene:ZFHX3 / 463 HGNCID:777 Length:3703 Species:Homo sapiens


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lmx1aNP_729801.1 LIM1_Lmx1b 275..327 CDD:188757
LIM 333..388 CDD:295319
Homeobox 427..480 CDD:278475
ZFHX3NP_001373664.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..78
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 96..128
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 417..536
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 588..619
C2H2 Zn finger 673..693 CDD:275368
C2H2 Zn finger 728..745 CDD:275368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1148..1214
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1303..1354
C2H2 Zn finger 1362..1385 CDD:275368
C2H2 Zn finger 1403..1423 CDD:275371
C2H2 Zn finger 1431..1452 CDD:275371
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1490..1529
C2H2 Zn finger 1547..1571 CDD:275368
C2H2 Zn finger 1598..1616 CDD:275368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1629..1727
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1865..1938
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2030..2082
HOX 2145..2201 CDD:197696
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2204..2244
Homeobox 2245..2299 CDD:395001
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2376..2400
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2422..2520
COG5576 2594..2738 CDD:227863
Nuclear localization signal. /evidence=ECO:0000269|PubMed:24651376 2615..2617
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2619..2647
Homeobox 2645..2698 CDD:395001
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2771..2796
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2841..2871
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2912..2947
Homeobox 2950..3003 CDD:395001
Herpes_BLLF1 <3104..>3191 CDD:282904
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 3137..3267
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 3386..3449
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 3565..3703
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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