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Protein Alignment Lmx1a and hoxc8a

DIOPT Version :9

Sequence 1:	NP_729801.1	Gene:	Lmx1a / 39406	FlyBaseID:	FBgn0052105	Length:	640	Species:	Drosophila melanogaster
Sequence 2:	NP_001005771.1	Gene:	hoxc8a / 449648	ZFINID:	ZDB-GENE-990415-114	Length:	250	Species:	Danio rerio

Alignment Length:	113	Identity:	34/113 - (30%)
Similarity:	52/113 - (46%)	Gaps:	16/113 - (14%)

- Green bases have known domain annotations that are detailed below.

  Fly   415 LRP-----RDGRRGPKRPRTILTSQQRKQFKASFDQSPKPCRKVREALAKDTGLSVRVVQVWFQN 474
            :||     |:||:...|.:|:       :.:..|..:|...||.|..::....|:.|.|::||||
Zfish   142 MRPHAPGRRNGRQTYSRYQTL-------ELEKEFLFNPYLTRKRRIEVSHALSLTERQVKIWFQN 199

  Fly   475 QRAKMKKIQRKAKQNGGSGGGSGSGRGTGNSSAT----DDKDTNDKED 518
            :|.|.||...|.|..|..|.........||....    :||:|.:||:
Zfish   200 RRMKWKKENNKDKFPGQRGEAEAEAEEEGNEDGEAEEGEDKETEEKEE 247

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.