Sequence 1: | NP_729801.1 | Gene: | Lmx1a / 39406 | FlyBaseID: | FBgn0052105 | Length: | 640 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001004015.1 | Gene: | lhx6a / 445565 | ZFINID: | ZDB-GENE-041025-1 | Length: | 375 | Species: | Danio rerio |
Alignment Length: | 388 | Identity: | 105/388 - (27%) |
---|---|---|---|
Similarity: | 157/388 - (40%) | Gaps: | 105/388 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 109 VPINSCPTPTGHS-PLSSSSSNSNHNNNNNNNNGGSSSNNLHSACNTLTAAAVAAASAAAVAAPS 172
Fly 173 PAGTSVATSQLGGAVAAAIAAAAAAAAAATTPTSTGPAATGSGNANGSGNGNGNGNGNGNGNGNG 237
Fly 238 NGGGAATASAAAASKLSADCSGRTEVGHIKCEKNFELCEGCGQKIHDRFLMNVGDANWHEQCLAC 302
Fly 303 CYC--GMQLHHTCYVRNSKLYCKMDYDRLFGVKCSSCCHAILPQELVMRPIPNFVFHLPCFVCYA 365
Fly 366 CRLPLQKGEQFMLRDGQLFCYRH-DLEKEMFLAAAAAQHCGFVGLDEEDLL-RPRDGRRGP-KRP 427
Fly 428 RTILTSQQRKQFKASFDQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQNG 490 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lmx1a | NP_729801.1 | LIM1_Lmx1b | 275..327 | CDD:188757 | 22/53 (42%) |
LIM | 333..388 | CDD:295319 | 19/54 (35%) | ||
Homeobox | 427..480 | CDD:278475 | 24/52 (46%) | ||
lhx6a | NP_001004015.1 | LIM1_Lhx6 | 97..150 | CDD:188766 | 21/52 (40%) |
LIM2_Lhx6 | 158..212 | CDD:188768 | 18/54 (33%) | ||
Homeobox | 250..302 | CDD:278475 | 24/51 (47%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |