Sequence 1: | NP_729801.1 | Gene: | Lmx1a / 39406 | FlyBaseID: | FBgn0052105 | Length: | 640 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001262808.1 | Gene: | slou / 42547 | FlyBaseID: | FBgn0002941 | Length: | 698 | Species: | Drosophila melanogaster |
Alignment Length: | 647 | Identity: | 131/647 - (20%) |
---|---|---|---|
Similarity: | 205/647 - (31%) | Gaps: | 283/647 - (43%) |
- Green bases have known domain annotations that are detailed below.
Fly 16 GSLYS----LQQNHGGARFLDNPNPGSMTASSGNSLHLSNSNNNL------PTSIS--GNNSPTA 68
Fly 69 TASL--------------------------------------TGQHQQHQQQQHQQQQQHPHQQH 95
Fly 96 QQHQQQH-----------------AASTTPVPINSCPTPTGHSPLSSSSSNSNHNNNNNN----- 138
Fly 139 ------------------------------------NNGGSSSNNLHSACNTLTAAAVAAASAAA 167
Fly 168 VAAPSPAGTSVA----TSQLGGAVAAAIAAAAAAAAAATTPTSTGPAATGSGNANGSGNGNGNGN 228
Fly 229 GNGNGNGNG--------------NGGGAATASAAAASKLSADCSGRTEVGHIKCEKNFELCEGCG 279
Fly 280 QKI------HDRFLMNVGDANWHEQCLACCYCGMQLHHTCYVRNSKLYCKMDYDRLFGVKCSSCC 338
Fly 339 HAILPQELVMRPIPNFVFHLPCFVCYACRLPLQKGEQFMLRDGQLFCYRHDLEKEMFLAAAAAQH 403
Fly 404 CGFVGLDEEDLLRPRDGRRG------------------PKRPRTILTSQQRKQFKASFDQSP--K 448
Fly 449 PCRKVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQNGG----------SGGGS-GSG 499 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lmx1a | NP_729801.1 | LIM1_Lmx1b | 275..327 | CDD:188757 | 8/57 (14%) |
LIM | 333..388 | CDD:295319 | 2/54 (4%) | ||
Homeobox | 427..480 | CDD:278475 | 16/54 (30%) | ||
slou | NP_001262808.1 | Homeobox | 549..601 | CDD:278475 | 16/53 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 45 | 1.000 | Domainoid score | I3555 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |