Protein Alignment Lmx1a and NK7.1

DIOPT Version :9

• Sequence 1: NP_729801.1
• Gene: Lmx1a / 39406
• FlyBaseID: FBgn0052105
• Length: 640
• Species: Drosophila melanogaster
• Sequence 2: NP_001247103.1
• Gene: NK7.1 / 41747
• FlyBaseID: FBgn0024321
• Length: 721
• Species: Drosophila melanogaster
• Alignment Length: 687
• Identity: 127/687 - (18%)
• Similarity: 182/687 - (26%)
• Gaps: 321/687 - (46%)

  Fly    36 PGSMT----ASSGNSLH-LSN-----SNNNLPTSISGNNSPTAT--------------ASLTGQH 76
            |.|||    :..|||.. |.|     .|||:.::||  :||..|              :|:..||
  Fly    84 PTSMTTHMVSPIGNSKEKLVNMLRVRDNNNMASTIS--DSPPTTFLQKQLEAVVAPRPSSVHPQH 146

  Fly    77 QQHQQQQHQQQQQHPHQQHQQHQQQHAASTTPVPINSC---------PTPTGHSPLS-------- 124
            ||.|||..|.|||      ::.....|.:|||.|..:.         |.||.||...
  Fly   147 QQPQQQTVQLQQQ------RRSVSTPAITTTPGPPTNWHAHVYDRLPPHPTPHSIADILGMSFVK 205

  Fly   125 -------------SSSSNSNHNNNNNNNNGGSSSNNLHSACNTLTAAAVAAASAAAVAAPSPAGT 176
                         :.|.||............|||.::..|....:||...|.|||..||
  Fly   206 KERPEVAFDAQGPAKSPNSILKPYQEQQPIRSSSISMSDASEEESAAVAGATSAATAAA------ 264

  Fly   177 SVATSQLGGAVAAAIAAAAAA--------------------------------AAAATTPTSTG- 208
                     ||||.|.||..|                                ..:||...|:|
  Fly   265 ---------AVAATITAATVATPLDQPLNLCVVKKSRDSNNSPMPATKQSQILGKSATKKESSGK 320

  Fly   209 PAA-----------------TGSGN--------ANGSGNGNGNGNGNGNGNGNGNGGGAATASAA 248
            |||                 |||.:        ||.|.:...|.|.....|.|         |..
  Fly   321 PAAKKKKLSSTVALPPDISPTGSSDSLMRDKLMANNSSSPGSNVNAQMQSNAN---------STL 376

  Fly   249 AASKLSADCSGRTEVGHIKCEKNFELCEGCGQKIHDRFLMNVGDANWHEQCLACCYCGMQLHHTC 313
            ..::..:| ||.|
  Fly   377 ETTEDDSD-SGST---------------------------------------------------- 388

  Fly   314 YVRNSKLYCKMDYDRLFGVKCSSCCHAILPQELVMRPIPNFVFHLPCFVCYACRLPLQKGEQFML 378
                                                                             
  Fly   389 ----------------------------------------------------------------- 388

  Fly   379 RDGQLFCYRHDLEKEMFLAAAAAQHCGFVGLDEEDLLRPRDGRRGPKRPRTILTSQQRKQFKASF 443
                                                    |.|| .|:.||..|.:|..:.:..|
  Fly   389 ----------------------------------------DARR-KKKARTTFTGRQIFELEKMF 412

  Fly   444 DQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKK----IQRKAKQNGGSGGGSGSGRGTGN 504
            :.........|..:||...::...|::||||:|.|.||    ...:|.::..|....|:   ||.
  Fly   413 ENKKYLSASERTEMAKLLMVTETQVKIWFQNRRTKWKKQDNVTNNEAAEHKSSNAKPGA---TGT 474

  Fly   505 SSATDDKDTNDKEDKCVKQELGGDSSGYLGGLDSTFASQPLNPNLPFSPDDYPANSNDSFCSSDL 569
            ::.|...:..||..........|::        :|.|....:|.   ||:....|:|::..::::
  Fly   475 ATTTPSGEPTDKRSSNATSPTVGNA--------ATIAEIKKSPK---SPNRGSNNNNNNTLNNNV 528

  Fly   570 SLDGSNFDQLDDDADSLSLNNLELQSTSSSGNQHSHS 606
            :...................|..|:.|..:.||...|
  Fly   529 NNSEGKVPAKQSTTKIKKQLNALLEKTVKTANQAHRS 565

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lmx1a	NP_729801.1	LIM1_Lmx1b	275..327	CDD:188757	0/51 (0%)
		LIM	333..388	CDD:295319	0/54 (0%)
		Homeobox	427..480	CDD:278475	15/52 (29%)
NK7.1	NP_001247103.1	Homeobox	397..449	CDD:278475	15/51 (29%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	45	1.000	Domainoid score	I3555
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	1.000