Protein Alignment Lmx1a and isl1b

DIOPT Version :9

• Sequence 1: NP_729801.1
• Gene: Lmx1a / 39406
• FlyBaseID: FBgn0052105
• Length: 640
• Species: Drosophila melanogaster
• Sequence 2: NP_001002043.1
• Gene: isl1b / 415131
• ZFINID: ZDB-GENE-040624-1
• Length: 323
• Species: Danio rerio
• Alignment Length: 218
• Identity: 79/218 - (36%)
• Similarity: 118/218 - (54%)
• Gaps: 18/218 - (8%)

  Fly   275 CEGCGQKIHDRFLMNVG-DANWHEQCLACCYCGMQLHH--TCYVRNSKLYCKMDYDRLFGVKCSS 336
            |.|||.:|.|||::.|. |..||.:||.|..|...|..  ||::|:.|.:|:..|.||...||:.
Zfish    19 CVGCGLEILDRFIVRVSPDLEWHARCLKCAECHQFLDESCTCFIRDGKTFCREHYSRLSTSKCAK 83

  Fly   337 CCHAILPQELVMRPIPNFVFHLPCFVCYACRLPLQKGEQFMLRDGQLFCYRHDLEKEMFLAAAAA 401
            |..|.:.:|.|||...| ::|:.||.|..|..||..|::::|:||||.|..|..:    |.:|:.
Zfish    84 CDKAFISKEFVMRSQVN-IYHVQCFRCEGCNRPLLSGDEYVLQDGQLLCTDHHNK----LMSASI 143

  Fly   402 QHCGFVGLDEEDL--------LRPRDGRRGPKRPRTILTSQQRKQFKASFDQSPKPCRKVREALA 458
            ......|...|::        ::.|..|  ..|.||:|:..|....:..:..:|:|...::|.|.
Zfish   144 NQQKEAGDPSEEIKSTLSWSSMQRRSER--ATRVRTVLSETQLCMLQTCYTANPRPDALMKEQLV 206

  Fly   459 KDTGLSVRVVQVWFQNQRAKMKK 481
            :.||||.||::|||||:|.|.||
Zfish   207 EMTGLSPRVIRVWFQNKRCKDKK 229

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lmx1a	NP_729801.1	LIM1_Lmx1b	275..327	CDD:188757	22/54 (41%)
		LIM	333..388	CDD:295319	23/54 (43%)
		Homeobox	427..480	CDD:278475	21/52 (40%)
isl1b	NP_001002043.1	LIM1_Isl	19..73	CDD:188752	22/53 (42%)
		LIM	81..135	CDD:295319	22/54 (41%)
		HOX	174..228	CDD:197696	22/53 (42%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910