Protein Alignment Lmx1a and Unc-115b

DIOPT Version :9

• Sequence 1: NP_729801.1
• Gene: Lmx1a / 39406
• FlyBaseID: FBgn0052105
• Length: 640
• Species: Drosophila melanogaster
• Sequence 2: NP_731390.1
• Gene: Unc-115b / 41178
• FlyBaseID: FBgn0260463
• Length: 784
• Species: Drosophila melanogaster
• Alignment Length: 397
• Identity: 89/397 - (22%)
• Similarity: 140/397 - (35%)
• Gaps: 85/397 - (21%)

  Fly   260 RTEVGHIKCEKNFELCEGCGQKIHDRFLMNVGDANWHEQCLACCYCGMQL-HHTCYVRNSKLYCK 323
            |||:|.....|....|..|.:|.... ::.|.|.::|:.|..||.|...| ....:.:::..||.
  Fly    31 RTELGKTGQGKQKIYCAKCTKKCSGE-VLRVADNHFHKACFQCCQCKKSLATGGFFTKDNAYYCI 94

  Fly   324 MDYDRLFGVKCSSCCHAILPQELVMRPIPNFV---FHLPCFVCYACRLPLQKGEQFMLRDGQLFC 385
            .||.||:|.||::|      |:.|...:.:.:   :|..||.|..|:.|.:.|.:......::.|
  Fly    95 PDYQRLYGTKCANC------QQYVEGEVVSTMGKTYHQKCFTCSKCKQPFKSGSKVTNTGKEVLC 153

  Fly   386 YRHDLEKEMFLAAA----AAQHCGFVGLDEEDLLRPRDGRRGPKRPR---TILTSQQRK----QF 439
                   |..:..|    :.|..|             .|...|..|.   |..|:.|:.    ..
  Fly   154 -------EQCVTGAPVSPSRQATG-------------GGVSSPAPPAESPTRATAHQQHGSVISH 198

  Fly   440 KASF--DQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQNGGSGGGSGSG--- 499
            ||..  |..|..|....|.|.:...| |.:.:.|      .:...:.||.|...:|...|..
  Fly   199 KAHLKEDYDPNDCAGCGELLKEGQAL-VALDRQW------HVSCFRCKACQAVLNGEYMGKDAVP 256

  Fly   500 -------RGTGNSSATDDK----------DTNDKEDKCVKQELGGDSSG-----YLGGLDSTFAS 542
                   :|.|...|...:          |.:.....|.:....||..|     ||.|      |
  Fly   257 YCEKCYQKGFGVKCAYCSRFISGKVLQAGDNHHFHPTCARCTKCGDPFGDGEEMYLQG------S 315

  Fly   543 QPLNPNLPFSPDDYPANSNDSFCSSDLSLDGSNFDQLDDDADSLS---LNNLELQSTSSSGNQHS 604
            ...:|.....|.:.....|....:|.:....||.:..|.:.|.:|   |:.:.::|.:.|.|...
  Fly   316 AIWHPRCGPGPSESGIILNGGGGTSSVVGGASNGNFTDTECDRMSSSALSEMYIRSRTPSFNGSL 380

  Fly   605 HSHSNPH 611
            :|.|..|
  Fly   381 YSSSRKH 387

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lmx1a	NP_729801.1	LIM1_Lmx1b	275..327	CDD:188757	14/52 (27%)
		LIM	333..388	CDD:295319	13/57 (23%)
		Homeobox	427..480	CDD:278475	14/61 (23%)
Unc-115b	NP_731390.1	LIM1_abLIM	46..97	CDD:188713	13/51 (25%)
		LIM2_abLIM	102..157	CDD:188714	15/67 (22%)
		LIM3_abLIM	211..262	CDD:188715	11/57 (19%)
		LIM4_abLIM	270..326	CDD:188716	11/61 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.910