Protein Alignment Lmx1a and mnx1

DIOPT Version :9

• Sequence 1: NP_729801.1
• Gene: Lmx1a / 39406
• FlyBaseID: FBgn0052105
• Length: 640
• Species: Drosophila melanogaster
• Sequence 2: NP_001009885.1
• Gene: mnx1 / 405399
• ZFINID: ZDB-GENE-040409-1
• Length: 311
• Species: Danio rerio
• Alignment Length: 161
• Identity: 40/161 - (24%)
• Similarity: 62/161 - (38%)
• Gaps: 55/161 - (34%)

  Fly   425 KRPRTILTSQQRKQFKASFDQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQN 489
            :||||..||||..:.:..|..:....|..|..:|....|:...|::||||:|.|.|: .:|||:.
Zfish   178 RRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKR-SKKAKEQ 241

  Fly   490 GGSGGGSGSGRG----------------TGNSSATDD-KDTNDKEDKCVKQELGGDSSGYLGGLD 537
            .........|:|                :|.|:...| :|::|:|.
Zfish   242 AAQDAEKQKGKGNHDKMDGLEKDYQKVDSGKSNRIRDFRDSDDEEG------------------- 287

  Fly   538 STFASQPLNPNLPFSPDDYPANSNDSFCSSD 568
                            |:|..||:|  |||:
Zfish   288 ----------------DNYMLNSSD--CSSE 300

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lmx1a	NP_729801.1	LIM1_Lmx1b	275..327	CDD:188757
		LIM	333..388	CDD:295319
		Homeobox	427..480	CDD:278475	19/52 (37%)
mnx1	NP_001009885.1	Homeobox	180..233	CDD:278475	19/52 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910