Sequence 1: | NP_729801.1 | Gene: | Lmx1a / 39406 | FlyBaseID: | FBgn0052105 | Length: | 640 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001260559.1 | Gene: | Lim3 / 35184 | FlyBaseID: | FBgn0002023 | Length: | 555 | Species: | Drosophila melanogaster |
Alignment Length: | 630 | Identity: | 175/630 - (27%) |
---|---|---|---|
Similarity: | 236/630 - (37%) | Gaps: | 231/630 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 76 HQQHQQQ-QH-QQQQQHPHQQ----------------HQQ-----HQQQHAASTTPVPINSCPTP 117
Fly 118 TGHSPLSSSSSNSNHNNNNNNNNGGSSSNNLHSACNTLTAAAVAAASAAAVAAPSPAGTSVATSQ 182
Fly 183 LGGAVAAAIAAAAAAAAAATTPTSTGPAATGSGNANGSGNGNGNGNGNGNGNGNGNGGGAATASA 247
Fly 248 AAASKLSADCSGRTEVGHIKCEKNFELCEGCGQKIHDRFLMNVGDANWHEQCLACCYCGMQLHHT 312
Fly 313 CYVRNSKLYCKMDYDRLFGVKCSSCCHAILPQELVMRPIPNFVFHLPCFVCYACRLPLQKGEQF- 376
Fly 377 MLRDGQLFCYRHDLEKEMFLAAAAAQHCGFVGLDEEDLLRPRDGRRGPKRPRTILTSQQRKQFKA 441
Fly 442 SFDQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQNGGSGGGSGSGRG-TGNS 505
Fly 506 SATDDKDTNDKE-----DKCVKQELGGDS------------------SGYLGGLDS--------- 538
Fly 539 ---------TFASQPLNPNLPFSPDDYPANS-----------NDSFCSSDLSLDGS------NFD 577
Fly 578 QLDDD--ADSLSLNNLELQSTSSSGNQHSHSHSNPHDMLANLNNS 620 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lmx1a | NP_729801.1 | LIM1_Lmx1b | 275..327 | CDD:188757 | 23/51 (45%) |
LIM | 333..388 | CDD:295319 | 22/55 (40%) | ||
Homeobox | 427..480 | CDD:278475 | 31/52 (60%) | ||
Lim3 | NP_001260559.1 | LIM1_Lhx3_Lhx4 | 122..173 | CDD:188754 | 22/50 (44%) |
LIM2_Lhx3_Lhx4 | 181..236 | CDD:188762 | 22/56 (39%) | ||
Homeobox | 259..312 | CDD:278475 | 31/52 (60%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45444992 | |
Domainoid | 1 | 1.000 | 47 | 0.796 | Domainoid score | I4515 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR24208 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.940 |