Protein Alignment Lmx1a and unc-97

DIOPT Version :9

• Sequence 1: NP_729801.1
• Gene: Lmx1a / 39406
• FlyBaseID: FBgn0052105
• Length: 640
• Species: Drosophila melanogaster
• Sequence 2: NP_508943.3
• Gene: unc-97 / 180827
• WormBaseID: WBGene00006826
• Length: 348
• Species: Caenorhabditis elegans
• Alignment Length: 318
• Identity: 65/318 - (20%)
• Similarity: 91/318 - (28%)
• Gaps: 142/318 - (44%)

  Fly   264 GHIKCEKNFEL-----CEGCGQKIHDRFL--MNVGDANWHEQCLACCYCGMQL------------ 309
            |...||.:|.:     |..|.:.|..|.:  ||   |:||..|..|..|..||
 Worm    66 GRKYCEHDFHVLFSPCCGKCNEFIVGRVIKAMN---ASWHPGCFCCEICNKQLADVGFLRNAGRA 127

  Fly   310 -------------H-----HTCYVR-----------------------------------NSKLY 321
                         |     |.|:..                                   |.:||
 Worm   128 LCRECNEREKAAGHGRYVCHKCHAMIDDGQHIKFRGDSFHPYHFKCKRCNNELTTASREVNGELY 192

  Fly   322 CKMDYDRLFGVKCSSCCHAILPQELVMRPIPNFV-------FHLPCFVCYACRLPLQKGEQFMLR 379
            |...:|.: |:.....||         |||...|       :|:..|||..|..|. .|.:...|
 Worm   193 CLRCHDTM-GIPICGACH---------RPIEERVIAALGKHWHVEHFVCSVCEKPF-LGHRHYER 246

  Fly   380 DGQLFCYRHDLEK---------------EMFLA-----AAAAQHCGFVG--LDEEDLLRPRDGRR 422
            .|..:|.:| ..|               |:|.|     ......|.|..  ||::......|
 Worm   247 KGLPYCEQH-FHKLFGNLCFKCGDPCCGEVFQALQKTWCVKCFSCSFCDKKLDQKTKFYEFD--- 307

  Fly   423 GPKRPRTILTSQQRKQFKASFDQSPKPCRK-VREALAKDTGLSVRVVQVWFQNQRAKM 479
                        .:...|..:|:.|...:| :.|:| ||..:         :|||..|
 Worm   308 ------------MKPTCKRCYDRFPTELKKRISESL-KDRDV---------ENQRRSM 343

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lmx1a	NP_729801.1	LIM1_Lmx1b	275..327	CDD:188757	21/118 (18%)
		LIM	333..388	CDD:295319	16/61 (26%)
		Homeobox	427..480	CDD:278475	12/54 (22%)
unc-97	NP_508943.3	LIM1_PINCH	21..79	CDD:188717	4/12 (33%)
		LIM2_PINCH	82..133	CDD:188718	14/53 (26%)
		LIM3_PINCH	146..197	CDD:188719	6/50 (12%)
		LIM4_PINCH	203..256	CDD:188720	17/63 (27%)
		LIM5_PINCH	264..317	CDD:188721	9/67 (13%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910