Protein Alignment Lmx1a and unc-30

DIOPT Version :9

• Sequence 1: NP_729801.1
• Gene: Lmx1a / 39406
• FlyBaseID: FBgn0052105
• Length: 640
• Species: Drosophila melanogaster
• Sequence 2: NP_001021277.1
• Gene: unc-30 / 178265
• WormBaseID: WBGene00006766
• Length: 323
• Species: Caenorhabditis elegans
• Alignment Length: 422
• Identity: 83/422 - (19%)
• Similarity: 123/422 - (29%)
• Gaps: 190/422 - (45%)

  Fly   280 QKIHDRF---LMNVGDANWHEQCLACCYCGMQLHHTCYVRNSKLYCKMDYDRLFGVKCSSCCHAI 341
            |:.|:||   |:.||                ||.|                           |::
 Worm    15 QQSHNRFSNPLVCVG----------------QLDH---------------------------HSL 36

  Fly   342 LPQELV---MRPIPNFVFHLPCFVCYACRLP-------LQKGEQFMLRDGQLFCYRHDLEKEMFL 396
            ||:..:   :.|:.    |.|....|:..||       |.|.|...|          |:::|.
 Worm    37 LPEHSISSSLAPLT----HNPYAFNYSIPLPPTDITTKLPKLELLSL----------DVKQEQ-- 85

  Fly   397 AAAAAQHCGFVGLDEE--DLLRPRDGR----------RGPKRPRTILTSQQRKQFKASFDQSPKP 449
                         |:.  |...|.|..          :.|:|.||..||.|..:.:..|.::..|
 Worm    86 -------------DDNHLDTSSPTDSTGNGSTNGGKIQKPRRQRTHFTSHQLTELENWFSRNRYP 137

  Fly   450 CRKVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQNGGSGGGSGSGRGTGNSSATDDKDTN 514
            ....||.:|....|:...|:|||:|:|||.:|.:|....:.|.|
 Worm   138 DMACREEIAVWISLTEPRVRVWFKNRRAKWRKRERNYVIDNGQG--------------------- 181

  Fly   515 DKEDKCVKQELGGDSSGYLGGLDSTFASQPLNPNLPFSPDDYPANSNDSFCSSDLSLDGSNFDQL 579
              ..|...|.|..     ||.|.:||....|.                           |:..||
 Worm   182 --TTKVTAQSLDP-----LGSLQNTFPQTLLQ---------------------------SSSSQL 212

  Fly   580 DDDA----------------------------------DSLSLNNLELQSTSSSGNQHSHSHSNP 610
            ||.|                                  |......:.:..|:::....:.::..|
 Worm   213 DDSAVTSSSFYGYGGAWQQNPYYSRNNQTTFNWQIKPQDQFQFQTIPMSPTTATSRFSTAANLAP 277

  Fly   611 -HDMLANLNNSLINPIDKLYLM---QNSYFSS 638
             ....|..:.|..:..|||.||   .||..||
 Worm   278 LPTAQAAFSTSATSSNDKLKLMDGLSNSLSSS 309

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lmx1a	NP_729801.1	LIM1_Lmx1b	275..327	CDD:188757	10/49 (20%)
		LIM	333..388	CDD:295319	13/64 (20%)
		Homeobox	427..480	CDD:278475	19/52 (37%)
unc-30	NP_001021277.1	Homeobox	116..168	CDD:278475	19/51 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910