Sequence 1: | NP_729801.1 | Gene: | Lmx1a / 39406 | FlyBaseID: | FBgn0052105 | Length: | 640 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001036042.1 | Gene: | Lhx9 / 16876 | MGIID: | 1316721 | Length: | 397 | Species: | Mus musculus |
Alignment Length: | 301 | Identity: | 95/301 - (31%) |
---|---|---|---|
Similarity: | 130/301 - (43%) | Gaps: | 63/301 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 274 LCEGCGQKIHDRFLMNVGDANWHEQCLACCYCGMQLHH--TCYVRNSKLYCKMDYDRLFGV-KCS 335
Fly 336 SCCHAILPQELVMRPIPNFVFHLPCFVCYACRLPLQKGEQFMLRDGQLFCYRH-------DLEKE 393
Fly 394 MFLAAAAAQHCG-----FVGLDEEDLLRPRDGRRGP----------------------------- 424
Fly 425 -----KRPRTILTSQQRKQFKASFDQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKKIQR 484
Fly 485 KAKQNGGSGGGSG----------SGRGTGNSSATDDKD-TN 514 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lmx1a | NP_729801.1 | LIM1_Lmx1b | 275..327 | CDD:188757 | 23/53 (43%) |
LIM | 333..388 | CDD:295319 | 19/54 (35%) | ||
Homeobox | 427..480 | CDD:278475 | 23/52 (44%) | ||
Lhx9 | NP_001036042.1 | LIM1_Lhx2 | 61..124 | CDD:188853 | 23/53 (43%) |
LIM2_Lhx2_Lhx9 | 129..187 | CDD:188763 | 20/58 (34%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 248..272 | 2/23 (9%) | |||
Homeobox | 271..323 | CDD:278475 | 23/51 (45%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 330..365 | 9/34 (26%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 378..397 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |