Protein Alignment Lmx1a and LOC1277135

DIOPT Version :10

• Sequence 1: NP_729801.1
• Gene: Lmx1a / 39406
• FlyBaseID: FBgn0052105
• Length: 640
• Species: Drosophila melanogaster
• Sequence 2: XP_061502774.1
• Gene: LOC1277135 / 1277135
• VectorBaseID: AGAMI1_007026
• Length: 271
• Species: Anopheles gambiae
• Alignment Length: 279
• Identity: 89/279 - (31%)
• Similarity: 127/279 - (45%)
• Gaps: 42/279 - (15%)

  Fly   266 IKCEK---NFELCEGCGQKIHDRFLMNVGDANWHEQCLACCYCGMQLHH--TCYVRNSKLYCKMD 325
            ||.|:   ...:|..||:.|.|::|.::....||..||.|..|...|..  :||.|:.::||:.|
Mosquito     4 IKLEQLKTELRICTACGEPIADKYLFDIDGCAWHGSCLRCSVCLTLLERQPSCYFRDRQVYCRTD 68

  Fly   326 YDRLFGVKCSSCCHAILPQELVMRPIPNFVFHLPCFVCYACRLPLQKGEQFMLRDGQLFCYRHDL 390
            |.::||.|||.||..|...:.| |...:.||||.||.|..|...|..||||.|.|.::.|..|.:
Mosquito    69 YIKMFGAKCSKCCRTIAASDWV-RKARDLVFHLACFSCDTCGRQLSTGEQFALIDDKVMCKIHYM 132

  Fly   391 EKEMFLAAAAAQHCGFVGLDEEDLLRPRDGRRGPKRPRTILTSQQRKQFKASFDQSPKPCRKVRE 455
            :.....:.::...|...|.:          :...||.||..|.:|.:..:|:|.....|..:..|
Mosquito   133 DTVEDGSNSSDDGCSSDGYN----------KNKSKRVRTTFTEEQLQVLQANFQIDSNPDGQDLE 187

  Fly   456 ALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQNGGSGGGSGSGRGTGNSSATDDKDTNDKEDKC 520
            .:|:.||||.||.||||||.||:.||                        .....:|.|......
Mosquito   188 RIAQLTGLSKRVTQVWFQNSRARQKK------------------------HTHVPRDHNPNLFSA 228

  Fly   521 VKQELGGDSSGY--LGGLD 537
            ::|:|..:|||.  ||..|
Mosquito   229 LRQDLNNNSSGQTSLGDHD 247

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lmx1a	NP_729801.1	LIM1_Lmx1b	275..327	CDD:188757	19/53 (36%)
		LIM	333..388	CDD:413332	24/54 (44%)
		Homeodomain	425..481	CDD:459649	25/55 (45%)
LOC1277135	XP_061502774.1	None