Protein Alignment Lmx1a and Lmo1

DIOPT Version :9

• Sequence 1: NP_729801.1
• Gene: Lmx1a / 39406
• FlyBaseID: FBgn0052105
• Length: 640
• Species: Drosophila melanogaster
• Sequence 2: NP_001369493.1
• Gene: Lmo1 / 109594
• MGIID: 102812
• Length: 156
• Species: Mus musculus
• Alignment Length: 116
• Identity: 46/116 - (39%)
• Similarity: 65/116 - (56%)
• Gaps: 6/116 - (5%)

  Fly   275 CEGCGQKIHDRFLMNVGDANWHEQCL--ACCYCGM-QLHHTCYVRNSKLYCKMDYDRLFGV--KC 334
            |.||.:||.||:|:...|..|||.||  |||.|.: ::..|.|.:.:.:.|:.||.||||.  .|
Mouse    24 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFGTTGNC 88

  Fly   335 SSCCHAILPQELVMRPIPNFVFHLPCFVCYACRLPLQKGEQFMLRDGQLFC 385
            ::|...|...|:|||...| |:||.||.|..|......|::|.|::..:.|
Mouse    89 AACSKLIPAFEMVMRARDN-VYHLDCFACQLCNQRFCVGDKFFLKNNMILC 138

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lmx1a	NP_729801.1	LIM1_Lmx1b	275..327	CDD:188757	22/54 (41%)
		LIM	333..388	CDD:295319	19/53 (36%)
		Homeobox	427..480	CDD:278475
Lmo1	NP_001369493.1	LIM1_LMO1_LMO3	24..78	CDD:188774	21/53 (40%)
		LIM2_LMO1_LMO3	88..142	CDD:188775	19/52 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910