DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Lmx1a and ATHB54

DIOPT Version :9

Sequence 1:	NP_729801.1	Gene:	Lmx1a / 39406	FlyBaseID:	FBgn0052105	Length:	640	Species:	Drosophila melanogaster
Sequence 2:	NP_001322131.1	Gene:	ATHB54 / 10723019	AraportID:	AT1G27045	Length:	252	Species:	Arabidopsis thaliana

Alignment Length:	228	Identity:	50/228 - (21%)
Similarity:	87/228 - (38%)	Gaps:	54/228 - (23%)

- Green bases have known domain annotations that are detailed below.

  Fly   401 AQHCGFVG-----------LDEEDLLRPRDGRRGPKRPRTILTSQQRKQFKASFDQSPK--PCRK 452
            :.|..|.|           :||||:......|...|:.:  ||..|.:..:.||::..:  |.||
plant    33 SSHSAFYGSSSMINTETATMDEEDVCESYMMREITKKRK--LTPIQLRLLEESFEEEKRLEPDRK 95

  Fly   453 VREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQNGGSGGGSGSGRGTGNSSATDDKDTNDKE 517
            :  .||:..||....|.|||||:||:.|..|.:              ....:..|:..|...|.:
plant    96 L--WLAEKLGLQPSQVAVWFQNRRARYKTKQLE--------------HDCDSLKASYAKLKTDWD 144

  Fly   518 DKCVKQELGGDSSGYLGGLDSTFASQPLNPNLPFSPDDYPANSNDSFCSSDL---------SLDG 573
            ...|:.:.......:|..|.|.:..:.:.            |.:|:|...||         :|:.
plant   145 ILFVQNQTLKSKVQFLNRLTSHYFQESVQ------------NFDDTFKQVDLLKEKLKMQENLET 197

  Fly   574 SNFD--QLDDDADSLSLNNLELQSTSSSGNQHS 604
            .:.:  :|.::..|:..:|.:........||:|
plant   198 QSIERKRLGEEGSSVKSDNTQYSEEEGLENQYS 230

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Lmx1a	NP_729801.1	LIM1_Lmx1b	275..327	CDD:188757
		LIM	333..388	CDD:295319
		Homeobox	427..480	CDD:278475	20/54 (37%)
ATHB54	NP_001322131.1	None
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910