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Protein Alignment Lmx1a and hoxa7
DIOPT Version :9
Sequence 1: | NP_729801.1 |
Gene: | Lmx1a / 39406 |
FlyBaseID: | FBgn0052105 |
Length: | 640 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001363856.1 |
Gene: | hoxa7 / 101734257 |
XenbaseID: | XB-GENE-483655 |
Length: | 207 |
Species: | Xenopus tropicalis |
Alignment Length: | 137 |
Identity: | 39/137 - (28%) |
Similarity: | 57/137 - (41%) |
Gaps: | 14/137 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 383 LFCYRHD-----LEKEMFLAAAAAQHCGFVGLDEEDLLRPRDGRRGP--KRPRTILTSQQRKQFK 440
|.|...| |..|:..|..||.| ...|....:.|.....|| ||.|...|..|..:.:
Frog 76 LHCSSFDQNIPLLCNELPKAEEAALH---QQADSHFRIYPWMRSSGPDRKRGRQTYTRYQTLELE 137
Fly 441 ASFDQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQNGGSGGGSGSGRGTGNS 505
..|..:....|:.|..:|....|:.|.:::||||:|.|.|| :.|:..|....:|.. .|..:
Frog 138 KEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK---EHKEESGQTPDAGED-STAPT 198
Fly 506 SATDDKD 512
:..:|||
Frog 199 TTAEDKD 205
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R3844 |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.030 |
|
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