Protein Alignment Lmx1a and lhx6

DIOPT Version :9

• Sequence 1: NP_729801.1
• Gene: Lmx1a / 39406
• FlyBaseID: FBgn0052105
• Length: 640
• Species: Drosophila melanogaster
• Sequence 2: XP_002941184.1
• Gene: lhx6 / 100493242
• XenbaseID: XB-GENE-493341
• Length: 389
• Species: Xenopus tropicalis
• Alignment Length: 378
• Identity: 110/378 - (29%)
• Similarity: 166/378 - (43%)
• Gaps: 97/378 - (25%)

  Fly   270 KNFELCEGCGQKIHDRFLMNVGDANWHEQCLACCYC--GMQLHHTCYVRNSKLYCKMDYDRLFGV 332
            ||  :|..||.:|.||:|:.|.:..||.:||.|..|  .::.|::||::|.:::|||||...||.
 Frog    93 KN--ICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQHNSCYIKNKEIFCKMDYFSRFGT 155

  Fly   333 KCSSCCHAILPQELVMRPIPNFVFHLPCFVCYACRLPLQKGEQFMLRDGQLFCYRH------DLE 391
            ||:.|...|...:.|.|...| .:||.||.||:|:..|..||:|.|.:.::.|..|      :|:
 Frog   156 KCARCGRQIYASDWVRRARGN-AYHLACFACYSCKRQLSTGEEFGLVEEKVLCRIHYDTMIENLK 219

  Fly   392 KEMFLAAAAAQHCGFVGLD-----EEDLLRPRDGRRGPKRPRTILTSQQRKQFKASFDQSPKPCR 451
            :       ||::...:.|:     |:| .:|:..    ||.||..|::|.:..:|.|.|...|..
 Frog   220 R-------AAENGNGITLEGAVPSEQD-SQPKPA----KRARTSFTAEQLQVMQAQFAQDNNPDA 272

  Fly   452 KVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQNGGSGGGSGSGRGTGNSSATDDKDTNDK 516
            :..:.||..||||.||:||||||.||:.||   ...|:|....|....|.|  ||.:||
 Frog   273 QTLQKLADMTGLSRRVIQVWFQNCRARHKK---HTPQHGVPPQGPTPTRIT--SSLSDD------ 326

  Fly   517 EDKCVKQELGGDSSGYLGGLDSTFASQPLNPNLPFSPDDYPANSNDSFCSSDLSLDGSNFDQLDD 581
                                            |.|||.:.|                       :
 Frog   327 --------------------------------LHFSPFNSP-----------------------E 336

  Fly   582 DADSLSLNNLELQSTSSSGNQHSH--SHSNPHDMLANLNNSLINPIDKLYLMQ 632
            .|..::|:.. ::|....|..|..  ....|..:.|::..:|.|..||:.|.|
 Frog   337 RARMVTLHGY-IESQVQCGQMHCRLPYAGPPVHLKADMEATLSNRGDKVILFQ 388

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lmx1a	NP_729801.1	LIM1_Lmx1b	275..327	CDD:188757	22/53 (42%)
		LIM	333..388	CDD:295319	20/54 (37%)
		Homeobox	427..480	CDD:278475	24/52 (46%)
lhx6	XP_002941184.1	LIM1_Lhx6	96..149	CDD:188766	21/52 (40%)
		LIM2_Lhx6	157..211	CDD:188768	19/54 (35%)
		Homeobox	249..302	CDD:365835	24/52 (46%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910