Protein Alignment Lmx1a and sia2

DIOPT Version :9

• Sequence 1: NP_729801.1
• Gene: Lmx1a / 39406
• FlyBaseID: FBgn0052105
• Length: 640
• Species: Drosophila melanogaster
• Sequence 2: XP_002942206.3
• Gene: sia2 / 100489935
• XenbaseID: XB-GENE-482070
• Length: 220
• Species: Xenopus tropicalis
• Alignment Length: 162
• Identity: 40/162 - (24%)
• Similarity: 59/162 - (36%)
• Gaps: 64/162 - (39%)

  Fly   388 HDLEKEMFLAAAAAQHCGFVGLDEEDLLRPRDGRRGPKRP------------------------- 427
            ||||.                 ::|.|....:..:|.|||
 Frog    81 HDLEP-----------------NKESLSTNNEISKGRKRPLYEEEQRESKKPKLEMDHYLPSART 128

  Fly   428 ----RTILTSQQRKQFKASFDQSPKPCRKVREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQ 488
                |||.:.:|....:..||.:|.|....|..:||.||:....:||||||:||  :.:.|
 Frog   129 RCRRRTIYSKEQTLFLQDQFDLNPYPDFVSRCHIAKITGIPEPRIQVWFQNRRA--RHLLR---- 187

  Fly   489 NGGSGGGSGSGRGTGNSSATDDKDTNDKEDKC 520
                  .:||....||:|.|::      |.:|
 Frog   188 ------ATGSQVPHGNTSLTEE------EPRC 207

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lmx1a	NP_729801.1	LIM1_Lmx1b	275..327	CDD:188757
		LIM	333..388	CDD:295319	40/162 (25%)
		Homeobox	427..480	CDD:278475	22/81 (27%)
sia2	XP_002942206.3	COG5576	69..>183	CDD:227863	31/120 (26%)
		Homeobox	132..184	CDD:395001	21/53 (40%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910