Protein Alignment Lmx1a and lhx9

DIOPT Version :9

• Sequence 1: NP_729801.1
• Gene: Lmx1a / 39406
• FlyBaseID: FBgn0052105
• Length: 640
• Species: Drosophila melanogaster
• Sequence 2: XP_004913801.1
• Gene: lhx9 / 100489035
• XenbaseID: XB-GENE-492044
• Length: 398
• Species: Xenopus tropicalis
• Alignment Length: 317
• Identity: 99/317 - (31%)
• Similarity: 144/317 - (45%)
• Gaps: 59/317 - (18%)

  Fly   246 SAAAASKLS--ADCSGR-TEVGHIKCEKNFELCEGCGQKIHDRFLMNVGDANWHEQCLACCYCGM 307
            |.:|.|:|:  ...:|| |.:..:..||. .||.|||.||.||:.:...|..||.:||.||.|.:
 Frog    41 SKSADSRLAKGIQVNGRETRMPSLSPEKP-ALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKL 104

  Fly   308 QLHH--TCYVRNSKLYCKMDYDRLFGV-KCSSCCHAILPQELVMRPIPNFVFHLPCFVCYACRLP 369
            .|..  ||:.::..:|||.||.|.|.| :|:.|...|...|:|||...: |:||.||.|..|...
 Frog   105 ALESELTCFAKDGSIYCKEDYYRRFSVQRCARCHLGISASEMVMRARES-VYHLSCFTCTTCNKT 168

  Fly   370 LQKGEQFMLRDGQLFCYRH-------DLEKEMFLAAAAAQHCGF--------------------- 406
            |..|:.|.:::..::|..|       |..:::.....:|:..|.
 Frog   169 LSTGDHFGMKENLVYCRIHFELLVQGDFHQQLNYTELSAKGGGIATLPYFSNGTGTVQKGRPRKR 233

  Fly   407 ----VGLD-----------EEDLLRPRDGRRGP----KRPRTILTSQQRKQFKASFDQSPKPCRK 452
                :|:|           |.||  .||....|    ||.||.....|.:..|:.|..:..|..|
 Frog   234 KSPALGVDIINYSSGCNENETDL--DRDQTYPPSQKTKRMRTSFKHHQLRTMKSYFAINHNPDAK 296

  Fly   453 VREALAKDTGLSVRVVQVWFQNQRAKMKKIQRKAKQNGGS--GGGSGSGRGTGNSSA 507
            ..:.||:.|||:.||:||||||.|||.::...:.:..||.  .|.|.|...:..|:|
 Frog   297 DLKQLAQKTGLTKRVLQVWFQNARAKFRRNLLRQENGGGDKVEGPSLSAPASAESAA 353

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lmx1a	NP_729801.1	LIM1_Lmx1b	275..327	CDD:188757	23/53 (43%)
		LIM	333..388	CDD:295319	18/54 (33%)
		Homeobox	427..480	CDD:278475	23/52 (44%)
lhx9	XP_004913801.1	LIM1_Lhx2	62..125	CDD:188853	25/63 (40%)
		LIM2_Lhx2_Lhx9	130..188	CDD:188763	19/58 (33%)
		Homeobox	272..325	CDD:365835	23/52 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910