Sequence 1: | NP_729801.1 | Gene: | Lmx1a / 39406 | FlyBaseID: | FBgn0052105 | Length: | 640 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009298059.1 | Gene: | lmx1al / 100149437 | ZFINID: | ZDB-GENE-131213-1 | Length: | 406 | Species: | Danio rerio |
Alignment Length: | 397 | Identity: | 165/397 - (41%) |
---|---|---|---|
Similarity: | 206/397 - (51%) | Gaps: | 71/397 - (17%) |
- Green bases have known domain annotations that are detailed below.
Fly 273 ELCEGCGQKIHDRFLMNVGDANWHEQCLACCYCGMQLHHTCYVRNSKLYCKMDYDRLFGVKCSSC 337
Fly 338 CHAILPQELVMRPIPNFVFHLPCFVCYACRLPLQKGEQFMLRDGQLFCYRHDLEK--EMFLAAAA 400
Fly 401 AQHCGFVGLDEE-----------DLLRPRDGR--RGPKRPRTILTSQQRKQFKASFDQSPKPCRK 452
Fly 453 VREALAKDTGLSVRVVQVWFQNQRAKMKKI-----QRKAKQNGGSGGGSGSGRGTGNSSATDDKD 512
Fly 513 TNDKEDKCVKQELGGDSSGYLGGLDSTFASQPLNPNLPFSPDDY-----------PANSNDSFCS 566
Fly 567 SDLSLDGSNFDQLDDDADSLSLNNLELQSTSSSGNQHSHSHSNPHDMLANLNNSLINPIDKLYLM 631
Fly 632 QNSYFSS 638 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lmx1a | NP_729801.1 | LIM1_Lmx1b | 275..327 | CDD:188757 | 25/51 (49%) |
LIM | 333..388 | CDD:295319 | 26/54 (48%) | ||
Homeobox | 427..480 | CDD:278475 | 42/52 (81%) | ||
lmx1al | XP_009298059.1 | LIM1_Lmx1b | 52..104 | CDD:188757 | 25/51 (49%) |
LIM | 111..165 | CDD:295319 | 26/55 (47%) | ||
Homeobox | 212..265 | CDD:278475 | 42/52 (81%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 74 | 1.000 | Domainoid score | I9077 |
eggNOG | 1 | 0.900 | - | - | E33208_3BAC6 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H136689 | |
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D323174at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001820 | |
OrthoInspector | 1 | 1.000 | - | - | otm24731 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_105498 | |
Panther | 1 | 1.100 | - | - | O | PTHR24208 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X1182 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.780 |