DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cdc5l and Cdc5

DIOPT Version :9

Sequence 1:NP_957378.2 Gene:cdc5l / 394059 ZFINID:ZDB-GENE-040426-821 Length:800 Species:Danio rerio
Sequence 2:NP_001163313.1 Gene:Cdc5 / 38062 FlyBaseID:FBgn0265574 Length:814 Species:Drosophila melanogaster


Alignment Length:814 Identity:510/814 - (62%)
Similarity:622/814 - (76%) Gaps:33/814 - (4%)


- Green bases have known domain annotations that are detailed below.


Zfish     1 MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSR 65
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly     1 MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSR 65

Zfish    66 EEEEKLLHMAKLMPTQWRTIAPIIGRTAAQCLEHYEYLLDKAAQRENEDDVGDDPRKLKPGEIDP 130
            ||:|||||:||||||||||||||||||||||||.||||||:|.::|:.:|..|||||||||||||
  Fly    66 EEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQRKEDGEDTMDDPRKLKPGEIDP 130

Zfish   131 NPETKPARPDPVDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAG 195
            |||||||||||.|||||||||||||||||||||||||||||||||||||||||.|||||||||||
  Fly   131 NPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLATLQKRRELRAAG 195

Zfish   196 IDIQKKRKKKRGVDYNAEIPFEKKPAQGFYDTSMEQYDPLEPDFKRLRQQHLDGELRSEKEDRDR 260
            |. ...||:.:|:||||||||||:||.||||||.|.....||||.::|||.||||||||||:|:|
  Fly   196 IG-SGNRKRIKGIDYNAEIPFEKRPAHGFYDTSEEHLQKNEPDFNKMRQQDLDGELRSEKEERER 259

Zfish   261 KKDRQKIKKKKESDLPSAILQTSGVSEFTKKRSKLVLPAPQISDAELEEVVKLGQASEIARQTAE 325
            |:|:||:|::||:::|:|:||.   .|..:||||||||.|||||.||::|||||:|||:|::.|.
  Fly   260 KRDKQKLKQRKENEVPTAMLQN---MEPERKRSKLVLPTPQISDMELQQVVKLGRASEMAKEIAG 321

Zfish   326 ESGITNSASSALLSEYNVTNNSMALRTPKTPAA-QDKILQEAQNLMALTNVDTPLKGGLNTPLHE 389
            ||||  ..:.|||::|::|....|  ||:|||. .|:|:|||||:||||:.:|||||||||||||
  Fly   322 ESGI--ETTDALLADYSITPQVAA--TPRTPAPYTDRIMQEAQNMMALTHTETPLKGGLNTPLHE 382

Zfish   390 SDFSGVTPQRQVVQTPNTVLSTPFRTPSHTGEGLTPHGGLTPKA-----------SVGVTPGRTP 443
            ||||||.|:...:.|||||::||||| ...|...||.|..||.:           :.||......
  Fly   383 SDFSGVLPKAASIATPNTVIATPFRT-QREGGAATPGGFQTPSSGALVPVKGAGGATGVVNTPAY 446

Zfish   444 LRDKLNINTEEG-GVDYTDPSFSKHMQRESREHLRLGLMSLPVPKNDFEIVLPENAEKELEETEV 507
            :||||:||.||. ||..| |:..|:.|::.:..||.||.:||.|:||:|||:||..|.|..||. 
  Fly   447 VRDKLSINPEESMGVTET-PAHYKNYQKQLKSTLRDGLSTLPAPRNDYEIVVPEQEESERIETN- 509

Zfish   508 DESFVEDAAEIELRKQAVRDAEREKELRQRHTSVQRDLPRPSEVNETILRPHNVEPPLTDLQQAE 572
            .|..|||.|:::.|..|.::|.|::||.:|...:||.||||:|||..||||.:.:..||:.||||
  Fly   510 SEPAVEDQADVDARLLAEQEARRKRELEKRSQVIQRSLPRPTEVNTKILRPQSEKQNLTEQQQAE 574

Zfish   573 ELIKREMITMIHYDCLHHPFSDAKKTKGVNSSSNNAEHI-SYLEKTPYEKVSEEELKKAGDLLLQ 636
            ||||.|||||..||.:..|..        ..|.:..|.: ||.:..|||.:|::||.||..:|.:
  Fly   575 ELIKHEMITMQLYDSVKDPVP--------GQSQHKLEQLQSYFKANPYEDISQQELAKAKQMLTE 631

Zfish   637 EMEVVKHGMGHGDLSMEAYNQVWEECYSQVLYLPGQSRYTRANLASKKDRIDSLEKKLEMNRGHM 701
            ||||||..|.||:|.::.|.|||:||..||||||.|.|||||||||||||::|.||:||.||.||
  Fly   632 EMEVVKERMAHGELPLDVYAQVWQECLGQVLYLPSQHRYTRANLASKKDRLESAEKRLETNRRHM 696

Zfish   702 TAEAKRAAKMEKKMKILLGGYQSRAMGLLKQLSEVWDQLEQANLELHTFMELKKQEDLAIPRRQE 766
            ..||||..|:|||:|||.||||:||..|:|||.:.:.|:||.::.|.||..|.:||.:|:|||.|
  Fly   697 AKEAKRCGKIEKKLKILTGGYQARAQVLIKQLQDTYGQIEQNSVSLSTFRFLGEQEAIAVPRRLE 761

Zfish   767 ALREDVQRQQEREKELQQRFADLMLDKQTLSSKI 800
            :|:|||:||.:|||||||::|.|:.::.:|.|:|
  Fly   762 SLQEDVRRQMDREKELQQKYASLVEERDSLYSQI 795

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cdc5lNP_957378.2 SANT 8..56 CDD:197842 47/47 (100%)
Myb_DNA-bind_6 11..71 CDD:290632 58/59 (98%)
SANT_CDC5_II 56..107 CDD:212557 47/50 (94%)
SANT 60..106 CDD:197842 42/45 (93%)
Myb_Cef 404..653 CDD:288664 116/261 (44%)
Cdc5NP_001163313.1 SANT 8..56 CDD:197842 47/47 (100%)
Myb_DNA-bind_6 11..71 CDD:290632 58/59 (98%)
SANT_CDC5_II 56..108 CDD:212557 47/51 (92%)
SANT 60..104 CDD:197842 40/43 (93%)
Myb_Cef 397..648 CDD:288664 116/261 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580545
Domainoid 1 1.000 458 1.000 Domainoid score I469
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H13291
Inparanoid 1 1.050 963 1.000 Inparanoid score I311
OMA 1 1.010 - - QHG55711
OrthoDB 1 1.010 - - D195986at33208
OrthoFinder 1 1.000 - - FOG0002438
OrthoInspector 1 1.000 - - oto39306
orthoMCL 1 0.900 - - OOG6_102607
Panther 1 1.100 - - LDO PTHR45885
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R188
SonicParanoid 1 1.000 - - X1623
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1413.940

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