DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4328 and YOX1

DIOPT Version :10

Sequence 1:NP_648567.2 Gene:CG4328 / 39405 FlyBaseID:FBgn0036274 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_013685.1 Gene:YOX1 / 854981 SGDID:S000004489 Length:385 Species:Saccharomyces cerevisiae


Alignment Length:336 Identity:77/336 - (22%)
Similarity:128/336 - (38%) Gaps:83/336 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 EGCLKCTACSLHLVHSCYAREGKLYCRVDYERLYIRNHCLGCGLKIAADELVMRCHENVFHLKCF 285
            |..|:.|..|||...|.|..:...:.:.|        ..|...|. ::.|.|...|||       
Yeast    60 ESALRHTVTSLHENSSAYGDDMLKHTQSD--------SALSSQLN-SSQETVDESHEN------- 108

  Fly   286 ACVVCGALLKKGEQYVV--KQGQLFCRFDYEKEV-------EMLQGYDF--YGDELFP---PKLD 336
              ::...|..|...|.|  |:..:.......|.:       |..:.:.|  :..|.||   ||:|
Yeast   109 --LLLTPLNSKKRDYSVSSKKNDILTPLSAAKSIIIPSASKEKRRAFAFITHSQETFPKKEPKID 171

  Fly   337 GRRGPKRPRTILNTQQRRAFKASFEVSPKPCRKVRENLAKDTGLSLRIVQVWFQNQRAKVKK--- 398
            .....:|.|...::|:....:|.||..|.|.::.|..||:...::.:.||:||||:|..||:   
Yeast   172 NAPLARRKRRRTSSQELSILQAEFEKCPAPSKEKRIELAESCHMTEKAVQIWFQNKRQAVKRQRI 236

  Fly   399 --------IQKKAKQEPPSKGASDSQDSQESLD---SSLATKIKDE--------AHSDSESQLES 444
                    ||..:...||             ||   :.||:::|.:        :.|.|.|.||:
Yeast   237 ATSKSTTIIQTVSPPSPP-------------LDVHATPLASRVKADILRDGSSCSRSSSSSPLEN 288

  Fly   445 PYSTTSDGLTRMRCTIKDEQEQ-VPFN------CMETNKENCNKNSEPILNTILGLSYATFQQLM 502
            ........|.|...|...::.| :.|:      .:...|.:.|.....::|:|   .::..:   
Yeast   289 TPPRPHHSLNRRSSTPSIKRSQALTFHLNPQKKTLTPVKTSPNSRVNKLINSI---DHSPSK--- 347

  Fly   503 GPFAQTPMINP 513
               |:.|:.||
Yeast   348 ---AKRPVSNP 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4328NP_648567.2 LIM1_Lmx1b 199..251 CDD:188757 9/29 (31%)
LIM 259..313 CDD:413332 12/55 (22%)
COG5576 <332..439 CDD:227863 34/131 (26%)
HOX 341..393 CDD:197696 17/51 (33%)
YOX1NP_013685.1 COG5576 126..267 CDD:227863 38/153 (25%)

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