DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4328 and PXL1

DIOPT Version :10

Sequence 1:NP_648567.2 Gene:CG4328 / 39405 FlyBaseID:FBgn0036274 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_013016.4 Gene:PXL1 / 853965 SGDID:S000001798 Length:706 Species:Saccharomyces cerevisiae


Alignment Length:370 Identity:67/370 - (18%)
Similarity:122/370 - (32%) Gaps:112/370 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 GLNQLLLLNGNERMLTTPTTAATSVVVAAGRSASTKAGVAHNDKMASVSRTVNGSCSN---HNSS 95
            |||:..|...:...:.||.| ||::.|....:......::.|.|:     .:||:|.|   ..:|
Yeast   347 GLNEKRLSITSSENVETPYT-ATNLQVEQLIAQLDDVSLSRNAKL-----DMNGNCLNAVDRKAS 405

  Fly    96 NSSSSSSTNS---SSNMAINKQPMGMGPGTGTGMGTGTGHGPGPPNHTHCNRITL----GECSLN 153
            ....||:..|   |.::.:.:|         |.:...        ::|:.:|.|:    |:...:
Yeast   406 RFKKSSAYLSGYPSMDIPVTQQ---------TSIVQN--------SNTNLSRQTILVDKGDVDED 453

  Fly   154 GMDGFATPAAPPSASNTPQAPLGMASNSGMGMELGLAMASPQL---------------------- 196
            ......|....|......|:.:..::|.|||.:.......|.:                      
Yeast   454 APSESTTNGGTPIFYKFKQSNVEYSNNEGMGSQETFRTKLPTIEALQLQHKRNITDLREEIDNSK 518

  Fly   197 -----------------------------------SQCAHCCQPICDRYIMRVVEN----SFHEG 222
                                               ..|..|...:..:.:....||    .:|..
Yeast   519 SNDSHVLPNGGTTRYSSDADYKETEPIEFKYPPGEGPCRACGLEVTGKRMFSKKENELSGQWHRE 583

  Fly   223 CLKCTACSL----HLVHSCYAREGKLYCRVDYERLYIRNHCLGCGLKIAADELVMRCHEN----V 279
            |.||..|.:    |:  .||....:.||:..|..   .||.: |  |:.::.:...|.||    .
Yeast   584 CFKCIECGIKFNKHV--PCYILGDEPYCQKHYHE---ENHSI-C--KVCSNFIEGECLENDKVER 640

  Fly   280 FHLKCFACVVCGALLKKGEQYVVKQGQLFCRFDYEKEVEMLQGYD 324
            ||:.|..|.:|...:.  ..|.:..|::....:::.|..:.:|.|
Yeast   641 FHVDCLNCFLCKTAIT--NDYYIFNGEIPLCGNHDMEALLKEGID 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4328NP_648567.2 LIM1_Lmx1b 199..251 CDD:188757 14/59 (24%)
LIM 259..313 CDD:413332 12/57 (21%)
COG5576 <332..439 CDD:227863
HOX 341..393 CDD:197696
PXL1NP_013016.4 LIM1_UF1 556..614 CDD:188783 14/59 (24%)
LIM 621..672 CDD:259829 12/54 (22%)
Blue background indicates that the domain is not in the aligned region.

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