DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4328 and LOC799481

DIOPT Version :10

Sequence 1:NP_648567.2 Gene:CG4328 / 39405 FlyBaseID:FBgn0036274 Length:544 Species:Drosophila melanogaster
Sequence 2:XP_009302150.4 Gene:LOC799481 / 799481 -ID:- Length:356 Species:Danio rerio


Alignment Length:326 Identity:94/326 - (28%)
Similarity:150/326 - (46%) Gaps:44/326 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 NHTHCNRITLGECSLN-------GMDGFATPAAPPSASNTPQAPLGMASNSGMGMELGLAMASPQ 195
            |...|...| .|.|.|       ..:|.:.||:|.:...|      |||::..|..:        
Zfish    36 NARRCEDFT-RELSSNICMSLPEAKNGRSDPASPSALPET------MASDAFQGKAV-------- 85

  Fly   196 LSQCAHCCQPICDRYIMRVVENSFHEGCLKCTACSLHLVH--SCYAREGKLYCRVDYERLYIRNH 258
               |..|.:.|.||::::|.:..:|..||.|:.|...|..  :||.||.:::|::.|.|.: :..
Zfish    86 ---CTRCREHILDRHLLKVNDMCWHARCLSCSVCQTTLSEQTTCYVREREIFCKLHYFRRF-QTW 146

  Fly   259 CLGCGLKIAADELVMRCHENVFHLKCFACVVCGALLKKGEQYVVKQGQLFCRFDYEKEVEMLQGY 323
            |..|...:.:.:.|.|...||:||.||:|..|...|..||::.:...:|.||..|...::.|...
Zfish   147 CSCCRETLHSSDWVHRAKGNVYHLACFSCFSCKRQLSTGEEFALVGEKLLCRIHYSSMLDKLNRP 211

  Fly   324 DFYGDELFPPK-----LDGRRGP-KRPRTILNTQQRRAFKASFEVSPKPCRKVRENLAKDTGLSL 382
            ...|..:.|.|     .:.::.| ||.||.....|.:..:|.|.....|..::.::||:.||||.
Zfish   212 AEKGKSVSPEKALAAGCEIKQKPSKRARTSFTADQLQVMQAQFVQDNNPDAQMLQSLAEQTGLSR 276

  Fly   383 RIVQVWFQNQRAKVKKIQKKAKQEPPSKGAS--DSQDSQESL---DSSLATKIKDEA-HSDSESQ 441
            |::||||||.||:    .||....|.|.|.|  .|..:...|   :::|.|.:.:.. |.::.|.
Zfish   277 RVIQVWFQNCRAR----HKKHVSTPHSAGLSSLSSTSTVNELRYTETTLLTGLHNTCIHVNTASS 337

  Fly   442 L 442
            |
Zfish   338 L 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4328NP_648567.2 LIM1_Lmx1b 199..251 CDD:188757 17/53 (32%)
LIM 259..313 CDD:413332 18/53 (34%)
COG5576 <332..439 CDD:227863 37/118 (31%)
HOX 341..393 CDD:197696 22/52 (42%)
LOC799481XP_009302150.4 None

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