Protein Alignment CG4328 and lmx1a

DIOPT Version :9

• Sequence 1: NP_648567.2
• Gene: CG4328 / 39405
• FlyBaseID: FBgn0036274
• Length: 544
• Species: Drosophila melanogaster
• Sequence 2: NP_001020669.1
• Gene: lmx1a / 558036
• ZFINID: ZDB-GENE-041014-332
• Length: 366
• Species: Danio rerio
• Alignment Length: 377
• Identity: 140/377 - (37%)
• Similarity: 191/377 - (50%)
• Gaps: 84/377 - (22%)

  Fly   197 SQCAHCCQPICDRYIMRVVENSFHEGCLKCTACSLHLVHSCYAREGKLYCRVDYERLYIRNHCLG 261
            |.|..|.:.|.|||::||.:..:||.||.|.:|...|..:|:.|...|||:.||::|:: ..|.|
Zfish    24 SVCEGCNELIRDRYLLRVQDGLWHERCLHCASCREPLKDTCFLRNKTLYCKRDYQKLFV-VRCQG 87

  Fly   262 CGLKIAADELVMRCHEN-VFHLKCFACVVCGALLKKGEQYVVKQGQLFCRF-------------- 311
            |...|:..|||||...: ||||:||.|.|||..|:||:..|::...|||..
Zfish    88 CSEIISPSELVMRAQGSAVFHLRCFCCCVCGCRLQKGDHCVLRGDGLFCATHFHNQLASPTSSDS 152

  Fly   312 ----DYEKEVEMLQGYDFYGDELFPPKLDGRRGPKRPRTILNTQQRRAFKASFEVSPKPCRKVRE 372
                |.|::.:........|:......::.:| ||||||||.||||||||||||||.||||||||
Zfish   153 GKSEDIEEDNDDEDNLKTAGESNITGDVEHKR-PKRPRTILTTQQRRAFKASFEVSSKPCRKVRE 216

  Fly   373 NLAKDTGLSLRIVQVWFQNQRAKVKKIQKKAKQE-----PPSKGASDSQDSQESLDSSLATKI-- 430
            .||.:||||:|:|||||||||||:||:.::.:|:     |..|..|.||....:...:|..::
Zfish   217 TLAAETGLSVRVVQVWFQNQRAKMKKLVRRQQQQKQTVCPQEKRESPSQQHTATSCGALPVELEC 281

  Fly   431 -------KDEAHSDSESQLESPYSTTSDGLTRMR----------C-TIKDEQEQVPF----NCME 473
                   :.....||:|....|:   ..|||..:          | |:.||.:..|.    :||.
Zfish   282 AGSYPLPQQNLSLDSQSLKLDPF---RQGLTPPQMPGDHMHPYGCDTLYDETDSDPLCHFGDCMS 343

  Fly   474 TNKENCNKNSEPILNTILGLSYATFQQLMGPFAQTPMINPIDRLYSMQSSYF 525
            :::                ||:.|               |||||||||.|||
Zfish   344 SSE----------------LSFLT---------------PIDRLYSMQDSYF 364

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG4328	NP_648567.2	LIM1_Lmx1b	199..251	CDD:188757	21/51 (41%)
		LIM	259..313	CDD:295319	26/72 (36%)
		COG5576	<332..439	CDD:227863	59/120 (49%)
		HOX	341..393	CDD:197696	44/51 (86%)
lmx1a	NP_001020669.1	LIM1_Lmx1a	26..77	CDD:188756	20/50 (40%)
		LIM	84..140	CDD:295319	26/55 (47%)
		Homeobox	188..241	CDD:278475	45/52 (87%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	102	1.000	Domainoid score	I6784
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	248	1.000	Inparanoid score	I3233
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D323174at33208
OrthoFinder	1	1.000	-	-		FOG0001820
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR24208
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R3844
SonicParanoid	1	1.000	-	-		X1182
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
ZFIN	0	0.000	Not matched by this tool.
	10	10.060